Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AC092079.1-201ENST00000558620 1985 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 RNU1-130P-201ENST00000363930 160 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 SNORD113.2-201ENST00000364166 89 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AL136131.1-201ENST00000406079 803 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 SNRPFP1-201ENST00000414761 252 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AL139095.3-201ENST00000419672 1203 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 ATP5HP2-201ENST00000433885 485 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AL138787.1-202ENST00000437804 898 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AC245517.2-201ENST00000442890 346 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 HMGB3P8-201ENST00000449709 577 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 IGKV2-38-201ENST00000517443 247 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 MTND5P21-201ENST00000531961 522 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 MIR4646-201ENST00000580775 63 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AL049844.2-201ENST00000604280 628 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AC128687.2-201ENST00000609657 566 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 uc_338.13-201ENST00000618243 179 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AL049536.1-201ENST00000625043 744 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 U6.98-201ENST00000637157 84 ntBASIC3.73□□□□□ -1.81
CCDC58Q4VC31 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC58Q4VC31 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 MFSD8-220ENST00000641243 1422 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 OR5P1P-201ENST00000299512 925 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 SNORA70F-201ENST00000384142 135 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 RN7SKP106-201ENST00000410832 272 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC092832.1-201ENST00000422934 400 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 USP9YP31-201ENST00000431405 881 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 NFYAP1-201ENST00000431953 972 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 RN7SL330P-201ENST00000469709 307 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AP001086.1-201ENST00000494882 321 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC010342.1-201ENST00000514047 877 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 SMARCE1P4-201ENST00000523647 241 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 MIR4310-201ENST00000582950 57 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC068020.1-201ENST00000594215 661 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC020910.2-201ENST00000603635 610 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC015722.2-201ENST00000622210 551 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 NCAPGP1-201ENST00000505112 1814 ntBASIC3.72□□□□□ -1.81
CCDC58Q4VC31 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC58Q4VC31 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.71□□□□□ -1.81
CCDC58Q4VC31 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 BRAFP1-201ENST00000445336 2703 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AC008033.1-201ENST00000216407 1162 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 OR11H4-201ENST00000315409 1082 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 SNORA37-201ENST00000384504 129 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AL109941.1-201ENST00000401925 229 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 MTCO3P31-201ENST00000405526 789 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms