Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CR382285.2-201ENST00000624662 1495 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 CASC19-204ENST00000641001 2055 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 RNU6-925P-201ENST00000384629 104 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 SNORA57.1-201ENST00000391227 145 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 RNA5SP36-201ENST00000410197 133 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 RN7SKP263-201ENST00000411194 309 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 EIF4A1P3-201ENST00000411521 244 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 OR4C10P-201ENST00000434991 931 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 HSFY6P-201ENST00000445573 403 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 PGBD4P4-201ENST00000509673 613 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 HMGB1P47-201ENST00000511281 589 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 SNORA31.9-201ENST00000516429 84 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 SCARNA1-201ENST00000517138 166 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 MIR2116-201ENST00000517221 80 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 AC093510.2-201ENST00000562820 896 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 BNIP3P40-201ENST00000596017 556 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 ZNF92P2-201ENST00000600543 1059 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 ZYXP1-201ENST00000617638 118 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 AP000943.4-201ENST00000622912 357 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDS5AQ29RF7 BTBD10P1-201ENST00000549824 1352 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 AC009501.3-201ENST00000605001 1352 ntBASIC5.18□□□□□ -1.58
PDS5AQ29RF7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AP000542.2-201ENST00000623199 6179 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 RNA5SP22-201ENST00000365393 109 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 MIR1911-201ENST00000410783 80 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AL590806.1-201ENST00000415818 853 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AL356095.1-201ENST00000417217 199 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 UBE2D3P3-201ENST00000426992 425 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 COX6B1P7-201ENST00000430845 235 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AL513321.1-201ENST00000441175 761 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 EEF1A1P1-201ENST00000447052 739 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 FCF1P6-201ENST00000456841 595 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 RPS7P7-201ENST00000463499 571 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 RPL23AP73-201ENST00000492507 471 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 RNA5SP360-201ENST00000516555 118 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AC103833.1-201ENST00000517442 172 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 HMGB1P19-201ENST00000517578 577 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AC008759.1-201ENST00000589783 983 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 CR589904.2-201ENST00000612533 440 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AC025016.1-201ENST00000616746 682 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AC009704.2-201ENST00000618739 483 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 AC009269.6-201ENST00000621778 588 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 MFSD8-220ENST00000641243 1422 ntBASIC5.17□□□□□ -1.58
PDS5AQ29RF7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDS5AQ29RF7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDS5AQ29RF7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms