Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGN3Q15651 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGN3Q15651 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGN3Q15651 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HMGN3Q15651 RNA5SP246-201ENST00000458909 119 ntBASIC3.43□□□□□ -1.86
HMGN3Q15651 RPL7L1P8-201ENST00000469911 741 ntBASIC3.43□□□□□ -1.86
HMGN3Q15651 AC096741.1-201ENST00000472250 846 ntBASIC3.43□□□□□ -1.86
HMGN3Q15651 AF213884.1-201ENST00000488102 463 ntBASIC3.43□□□□□ -1.86
HMGN3Q15651 AC093720.1-201ENST00000505681 714 ntBASIC3.43□□□□□ -1.86
HMGN3Q15651 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGN3Q15651 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGN3Q15651 SNORA70.14-201ENST00000516205 110 ntBASIC3.43□□□□□ -1.86
HMGN3Q15651 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGN3Q15651 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGN3Q15651 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HMGN3Q15651 OR5AN2P-201ENST00000534535 896 ntBASIC3.43□□□□□ -1.86
HMGN3Q15651 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HMGN3Q15651 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HMGN3Q15651 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGN3Q15651 AC022655.2-201ENST00000577280 318 ntBASIC3.43□□□□□ -1.86
HMGN3Q15651 MIR4330-201ENST00000579077 105 ntBASIC3.43□□□□□ -1.86
HMGN3Q15651 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGN3Q15651 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.43□□□□□ -1.86
HMGN3Q15651 EIF1P6-201ENST00000600054 334 ntBASIC3.43□□□□□ -1.86
HMGN3Q15651 AC095038.2-201ENST00000621464 1070 ntBASIC3.43□□□□□ -1.86
HMGN3Q15651 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGN3Q15651 AL773545.4-201ENST00000637262 310 ntBASIC3.43□□□□□ -1.86
HMGN3Q15651 AL513478.4-201ENST00000641636 310 ntBASIC3.43□□□□□ -1.86
HMGN3Q15651 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGN3Q15651 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HMGN3Q15651 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
HMGN3Q15651 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HMGN3Q15651 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
HMGN3Q15651 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGN3Q15651 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGN3Q15651 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGN3Q15651 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGN3Q15651 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGN3Q15651 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGN3Q15651 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGN3Q15651 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGN3Q15651 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGN3Q15651 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.42□□□□□ -1.86
HMGN3Q15651 RNA5SP447-201ENST00000363749 119 ntBASIC3.42□□□□□ -1.86
HMGN3Q15651 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGN3Q15651 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGN3Q15651 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HMGN3Q15651 RN7SKP182-201ENST00000410772 298 ntBASIC3.42□□□□□ -1.86
HMGN3Q15651 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGN3Q15651 RPS27AP7-201ENST00000422792 455 ntBASIC3.42□□□□□ -1.86
HMGN3Q15651 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGN3Q15651 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGN3Q15651 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGN3Q15651 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HMGN3Q15651 FHP1-201ENST00000442741 703 ntBASIC3.42□□□□□ -1.86
HMGN3Q15651 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGN3Q15651 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGN3Q15651 AC009963.2-201ENST00000453431 138 ntBASIC3.42□□□□□ -1.86
HMGN3Q15651 Z95152.1-201ENST00000453556 656 ntBASIC3.42□□□□□ -1.86
HMGN3Q15651 snoU13.1-201ENST00000459157 104 ntBASIC3.42□□□□□ -1.86
HMGN3Q15651 RPL31P61-201ENST00000496160 376 ntBASIC3.42□□□□□ -1.86
HMGN3Q15651 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGN3Q15651 AC093824.1-201ENST00000508796 343 ntBASIC3.42□□□□□ -1.86
HMGN3Q15651 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGN3Q15651 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGN3Q15651 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.42□□□□□ -1.86
HMGN3Q15651 RNU7-143P-201ENST00000516781 65 ntBASIC3.42□□□□□ -1.86
HMGN3Q15651 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGN3Q15651 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.42□□□□□ -1.86
HMGN3Q15651 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGN3Q15651 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.42□□□□□ -1.86
HMGN3Q15651 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGN3Q15651 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGN3Q15651 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGN3Q15651 AC022146.1-201ENST00000595307 847 ntBASIC3.42□□□□□ -1.86
HMGN3Q15651 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGN3Q15651 AL161729.3-201ENST00000603533 673 ntBASIC3.42□□□□□ -1.86
HMGN3Q15651 AC020910.2-201ENST00000603635 610 ntBASIC3.42□□□□□ -1.86
HMGN3Q15651 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGN3Q15651 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
HMGN3Q15651 ASNSP1-201ENST00000518311 1939 ntBASIC3.42□□□□□ -1.86
HMGN3Q15651 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGN3Q15651 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGN3Q15651 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGN3Q15651 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGN3Q15651 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGN3Q15651 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HMGN3Q15651 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGN3Q15651 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGN3Q15651 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGN3Q15651 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGN3Q15651 IPO8P1-201ENST00000455509 3109 ntBASIC3.41□□□□□ -1.86
HMGN3Q15651 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGN3Q15651 AC116667.1-201ENST00000604855 2072 ntBASIC3.41□□□□□ -1.86
HMGN3Q15651 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGN3Q15651 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGN3Q15651 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGN3Q15651 FAR2P2-201ENST00000413041 594 ntBASIC3.41□□□□□ -1.86
HMGN3Q15651 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.41□□□□□ -1.86
HMGN3Q15651 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms