| FOXC1 | Q12948 | ANAPC5-204 | ENST00000441917 | 2147 nt | TSL 5 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | DTNA-225 | ENST00000595022 | 6016 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | MAPK10-329 | ENST00000641555 | 2656 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | PARP2-204 | ENST00000527915 | 1980 nt | TSL 2 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | C9orf131-201 | ENST00000312292 | 3409 nt | APPRIS P3 TSL 1 (best) BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AF121897.1-201 | ENST00000411867 | 3980 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | IQCA1-204 | ENST00000409907 | 3281 nt | APPRIS P3 TSL 1 (best) BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | TMEM251-201 | ENST00000283534 | 909 nt | APPRIS P1 TSL 1 (best) BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | Y_RNA.64-201 | ENST00000362845 | 102 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | RNA5SP485-201 | ENST00000365053 | 119 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | RN7SKP69-201 | ENST00000365390 | 305 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | RNU6-81P-201 | ENST00000365608 | 104 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | SNORD14.1-201 | ENST00000365609 | 90 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | SPRR2D-203 | ENST00000368757 | 800 nt | APPRIS P1 TSL 3 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | RNU6-532P-201 | ENST00000384318 | 107 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | Y_RNA.473-201 | ENST00000384333 | 102 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC092687.1-201 | ENST00000418835 | 389 nt | TSL 3 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC244035.3-201 | ENST00000428399 | 271 nt | TSL 2 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | RPL23AP89-201 | ENST00000439324 | 255 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AL139161.1-201 | ENST00000443207 | 190 nt | TSL 5 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC022215.1-201 | ENST00000481770 | 362 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | MTERF4-220 | ENST00000495694 | 909 nt | TSL 5 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC009901.1-201 | ENST00000506703 | 541 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC062004.1-202 | ENST00000524014 | 246 nt | TSL 5 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | PMS2P3-207 | ENST00000529061 | 717 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AL133481.2-201 | ENST00000538322 | 367 nt | TSL 2 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | A2MP1-201 | ENST00000543404 | 1201 nt | TSL 5 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | NOVA1-AS1-203 | ENST00000552101 | 468 nt | TSL 3 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC005519.1-201 | ENST00000554490 | 601 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | SLC7A7-210 | ENST00000554517 | 1158 nt | TSL 5 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | HSBP1P1-201 | ENST00000555205 | 166 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC090607.2-201 | ENST00000560331 | 695 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC084783.1-201 | ENST00000565846 | 910 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | RN7SL366P-201 | ENST00000577957 | 292 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC005544.1-201 | ENST00000584277 | 460 nt | TSL 3 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC008521.2-201 | ENST00000591021 | 259 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC011445.2-201 | ENST00000599274 | 173 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AL157899.1-201 | ENST00000604110 | 936 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC004832.4-201 | ENST00000608952 | 331 nt | BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | NAA60-237 | ENST00000615865 | 326 nt | TSL 5 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC244472.1-201 | ENST00000620773 | 347 nt | APPRIS P1 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC063952.1-204 | ENST00000635496 | 927 nt | TSL 5 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AL023755.1-201 | ENST00000441851 | 1801 nt | TSL 2 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | SLA-201 | ENST00000338087 | 3451 nt | APPRIS P1 TSL 1 (best) BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | ZNF385B-202 | ENST00000409343 | 2750 nt | TSL 2 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | ZNF670-ZNF695-202 | ENST00000474541 | 2751 nt | APPRIS ALT2 TSL 2 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | HRH1-203 | ENST00000431010 | 4278 nt | APPRIS P1 TSL 1 (best) BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | TPD52-213 | ENST00000520527 | 2638 nt | TSL 1 (best) BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | CFI-202 | ENST00000394635 | 2053 nt | APPRIS ALT2 TSL 2 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | ZNF667-202 | ENST00000504904 | 4390 nt | APPRIS P1 TSL 2 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | USPL1-201 | ENST00000255304 | 3814 nt | APPRIS P1 TSL 1 (best) BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC079061.1-201 | ENST00000499579 | 3075 nt | TSL 2 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | UBAP2L-220 | ENST00000613315 | 3451 nt | TSL 2 BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | EHHADH-201 | ENST00000231887 | 3850 nt | APPRIS P1 TSL 1 (best) BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | ZNF382-204 | ENST00000439428 | 2742 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | FMOD-201 | ENST00000354955 | 3310 nt | APPRIS P1 TSL 1 (best) BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | SPARC-201 | ENST00000231061 | 3701 nt | APPRIS P1 TSL 1 (best) BASIC | 6.7 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | HDAC1P2-201 | ENST00000453661 | 1398 nt | BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | TMEM192-201 | ENST00000306480 | 10012 nt | APPRIS P1 TSL 1 (best) BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | OAS2-202 | ENST00000392583 | 4734 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | FAM71D-211 | ENST00000612183 | 1790 nt | APPRIS P1 TSL 2 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | LINC01197-205 | ENST00000614853 | 1774 nt | TSL 3 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC018688.1-201 | ENST00000636528 | 1754 nt | BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | LINC01094-203 | ENST00000504675 | 1985 nt | TSL 2 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | DDX18P4-201 | ENST00000511690 | 1966 nt | BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | LINC01619-203 | ENST00000549802 | 2169 nt | TSL 2 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | ST7-203 | ENST00000393443 | 2360 nt | TSL 2 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | IL31RA-206 | ENST00000447346 | 2577 nt | APPRIS P3 TSL 1 (best) BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | OR11G2-202 | ENST00000641682 | 3786 nt | APPRIS P1 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC006213.6-201 | ENST00000623722 | 4179 nt | BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | PLA2R1-201 | ENST00000283243 | 14371 nt | APPRIS P3 TSL 1 (best) BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | POC1B-AS1-201 | ENST00000605233 | 8041 nt | TSL 2 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | PIRT-201 | ENST00000580256 | 3810 nt | APPRIS P1 TSL 2 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | FAM35A-201 | ENST00000298784 | 3402 nt | APPRIS P1 TSL 2 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | MNS1-201 | ENST00000260453 | 2023 nt | APPRIS P1 TSL 1 (best) BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | RRAS2-211 | ENST00000537760 | 2034 nt | TSL 2 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | KAT6B-203 | ENST00000372714 | 5892 nt | APPRIS ALT2 TSL 5 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | CDY18P-201 | ENST00000438294 | 1609 nt | BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | WNK3-203 | ENST00000375169 | 11172 nt | APPRIS ALT1 TSL 5 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AC005520.1-201 | ENST00000556551 | 3695 nt | APPRIS P1 TSL 2 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | PDE8B-208 | ENST00000505283 | 3474 nt | TSL 1 (best) BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | MAPK10-281 | ENST00000641170 | 3070 nt | BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | CFAP65-201 | ENST00000295729 | 2259 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | ZEB2-227 | ENST00000627532 | 9541 nt | APPRIS P2 TSL 1 (best) BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | AL442639.1-201 | ENST00000625030 | 1899 nt | BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | HIPK2-201 | ENST00000342645 | 2937 nt | TSL 5 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | SLC30A8-205 | ENST00000519688 | 5242 nt | TSL 1 (best) BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | FAM19A2-215 | ENST00000551619 | 2718 nt | APPRIS P1 TSL 2 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | TRIM42-201 | ENST00000286349 | 2539 nt | APPRIS P1 TSL 1 (best) BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | MAPK10-343 | ENST00000641677 | 2546 nt | BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | OR10W1-201 | ENST00000395079 | 1469 nt | APPRIS P1 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | LPL-201 | ENST00000311322 | 3846 nt | APPRIS P1 TSL 1 (best) BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | RAD51AP1-202 | ENST00000352618 | 2113 nt | APPRIS P3 TSL 1 (best) BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | SNORA62.1-201 | ENST00000364287 | 154 nt | BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | RNU6-806P-201 | ENST00000365147 | 105 nt | BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | TSACC-205 | ENST00000368255 | 751 nt | APPRIS P1 TSL 1 (best) BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | PAGE2-202 | ENST00000374968 | 551 nt | APPRIS P1 TSL 1 (best) BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | RNU6-1029P-201 | ENST00000384109 | 107 nt | BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | IGLV3-12-201 | ENST00000390313 | 356 nt | APPRIS P1 BASIC | 6.69 | □□□□□ -1.34 | | |
| FOXC1 | Q12948 | RNU6-1055P-201 | ENST00000391085 | 107 nt | BASIC | 6.69 | □□□□□ -1.34 | | |