Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC104629.1-201ENST00000494226 508 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 AC108693.1-201ENST00000496068 432 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN1BQ07699 AC010476.1-201ENST00000519111 851 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.32□□□□□ -1.72
SCN1BQ07699 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN1BQ07699 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN1BQ07699 AC068339.2-201ENST00000534395 618 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.32□□□□□ -1.72
SCN1BQ07699 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.32□□□□□ -1.72
SCN1BQ07699 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.32□□□□□ -1.72
SCN1BQ07699 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN1BQ07699 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN1BQ07699 AC004217.3-201ENST00000551552 878 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 AL049779.2-201ENST00000553847 315 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 AC087477.6-201ENST00000559595 843 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 FKBP1AP1-201ENST00000594588 318 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 AC015813.4-201ENST00000610469 179 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 AL121594.5-201ENST00000631724 573 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN1BQ07699 FAM157B-203ENST00000639350 358 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 ZNF33CP-201ENST00000432492 2030 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
SCN1BQ07699 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN1BQ07699 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN1BQ07699 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN1BQ07699 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SCN1BQ07699 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SCN1BQ07699 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SCN1BQ07699 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.31□□□□□ -1.72
SCN1BQ07699 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.31□□□□□ -1.72
SCN1BQ07699 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.31□□□□□ -1.72
SCN1BQ07699 RN7SKP113-201ENST00000363891 295 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCN1BQ07699 AC069282.1-201ENST00000411911 526 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.31□□□□□ -1.72
SCN1BQ07699 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN1BQ07699 CFL1P1-202ENST00000432948 411 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN1BQ07699 SPRYD7P1-201ENST00000443861 570 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 TDGF1P1-201ENST00000445734 527 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN1BQ07699 AL050341.1-201ENST00000447743 313 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN1BQ07699 Z95152.1-201ENST00000453556 656 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 AC009127.1-201ENST00000467090 155 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 RPS26P28-201ENST00000470806 348 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 RN7SL174P-201ENST00000475578 289 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 RN7SL799P-201ENST00000475891 298 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN1BQ07699 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN1BQ07699 AC112198.4-201ENST00000515450 351 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.31□□□□□ -1.72
SCN1BQ07699 HIGD1AP6-201ENST00000521833 279 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN1BQ07699 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN1BQ07699 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.31□□□□□ -1.72
SCN1BQ07699 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.31□□□□□ -1.72
SCN1BQ07699 AC104072.1-201ENST00000568817 668 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 MTND6P33-201ENST00000571794 183 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN1BQ07699 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN1BQ07699 LLPHP1-201ENST00000603571 367 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCN1BQ07699 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCN1BQ07699 AL158196.1-201ENST00000616786 434 ntBASIC4.31□□□□□ -1.72
SCN1BQ07699 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCN1BQ07699 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.31□□□□□ -1.72
SCN1BQ07699 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCN1BQ07699 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCN1BQ07699 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SCN1BQ07699 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCN1BQ07699 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SCN1BQ07699 AC009643.2-201ENST00000603543 1448 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 AL136964.1-201ENST00000622038 2990 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SCN1BQ07699 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCN1BQ07699 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SCN1BQ07699 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SCN1BQ07699 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCN1BQ07699 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.3□□□□□ -1.72
SCN1BQ07699 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCN1BQ07699 RNU5B-1-201ENST00000363286 116 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 RNU6-353P-201ENST00000364266 108 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 SNORA70E-201ENST00000384492 135 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SCN1BQ07699 RN7SKP126-201ENST00000411143 300 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.3□□□□□ -1.72
SCN1BQ07699 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN1BQ07699 EI24P4-201ENST00000423683 1078 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 AL121776.1-201ENST00000429337 372 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN1BQ07699 AC234064.1-201ENST00000436312 247 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN1BQ07699 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN1BQ07699 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN1BQ07699 SEPT14P24-201ENST00000447236 180 ntBASIC4.3□□□□□ -1.72
SCN1BQ07699 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.3□□□□□ -1.72
SCN1BQ07699 AC144530.1-201ENST00000452862 555 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms