Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC096861.1-201ENST00000616652 240 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AC006338.1-201ENST00000618453 749 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AC245014.3-201ENST00000618589 347 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 PISRT1-201ENST00000626175 531 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AC129915.3-201ENST00000634128 948 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AP000550.3-201ENST00000637734 379 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 AC117529.2-201ENST00000512159 2068 ntBASIC5.5□□□□□ -1.53
GFRA1P56159 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
GFRA1P56159 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.5□□□□□ -1.53
GFRA1P56159 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.5□□□□□ -1.53
GFRA1P56159 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
GFRA1P56159 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.5□□□□□ -1.53
GFRA1P56159 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.5□□□□□ -1.53
GFRA1P56159 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA1P56159 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA1P56159 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA1P56159 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA1P56159 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.5□□□□□ -1.53
GFRA1P56159 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.5□□□□□ -1.53
GFRA1P56159 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA1P56159 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.5□□□□□ -1.53
GFRA1P56159 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA1P56159 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.49□□□□□ -1.53
GFRA1P56159 AC073365.1-203ENST00000641055 1992 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.49□□□□□ -1.53
GFRA1P56159 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
GFRA1P56159 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.49□□□□□ -1.53
GFRA1P56159 AC011933.2-201ENST00000578539 2790 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
GFRA1P56159 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.49□□□□□ -1.53
GFRA1P56159 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 RNY4P34-201ENST00000364779 95 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
GFRA1P56159 USP9YP6-201ENST00000413550 854 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.49□□□□□ -1.53
GFRA1P56159 MTCYBP24-201ENST00000420387 1106 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AC096632.1-201ENST00000427395 310 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 FTLP19-201ENST00000433300 394 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 ARPC3P1-201ENST00000437218 533 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 RPL22P17-201ENST00000438729 315 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 MTCO3P18-201ENST00000440206 761 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AL662791.1-201ENST00000441992 928 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AL671855.1-201ENST00000446875 1203 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AC005077.1-201ENST00000449226 375 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 VDAC2P4-201ENST00000452925 711 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 USP9YP34-201ENST00000453983 808 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.49□□□□□ -1.53
GFRA1P56159 SEPT7P3-201ENST00000455017 621 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AC090142.1-201ENST00000465776 462 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AC092865.4-201ENST00000477936 615 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.49□□□□□ -1.53
GFRA1P56159 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.49□□□□□ -1.53
GFRA1P56159 AC010493.1-201ENST00000513479 292 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AC034159.1-201ENST00000513885 583 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AC104986.1-201ENST00000517978 436 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.49□□□□□ -1.53
GFRA1P56159 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.49□□□□□ -1.53
GFRA1P56159 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 TRIM77BP-201ENST00000524985 1119 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AP003396.4-201ENST00000527574 265 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
GFRA1P56159 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.49□□□□□ -1.53
GFRA1P56159 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.49□□□□□ -1.53
GFRA1P56159 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.49□□□□□ -1.53
GFRA1P56159 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.49□□□□□ -1.53
GFRA1P56159 NRBF2P1-201ENST00000587407 859 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.49□□□□□ -1.53
GFRA1P56159 AC020916.2-201ENST00000591242 360 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.49□□□□□ -1.53
GFRA1P56159 AL138895.2-201ENST00000603019 178 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.49□□□□□ -1.53
GFRA1P56159 AL359880.1-201ENST00000621879 266 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AC022400.9-201ENST00000623633 273 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 AC068880.5-201ENST00000624331 290 ntBASIC5.49□□□□□ -1.53
GFRA1P56159 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
GFRA1P56159 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA1P56159 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
GFRA1P56159 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
GFRA1P56159 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
GFRA1P56159 AL022578.1-201ENST00000439330 1433 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.48□□□□□ -1.53
GFRA1P56159 AL442128.2-201ENST00000620246 1824 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 AC010329.2-201ENST00000595195 2737 ntBASIC5.48□□□□□ -1.53
GFRA1P56159 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA1P56159 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA1P56159 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms