Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH13P55290 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH13P55290 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH13P55290 AC104446.1-201ENST00000613728 1321 ntBASIC4.55□□□□□ -1.68
CDH13P55290 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CDH13P55290 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH13P55290 RN7SKP104-201ENST00000362605 328 ntBASIC4.55□□□□□ -1.68
CDH13P55290 AL589647.1-201ENST00000402485 466 ntBASIC4.55□□□□□ -1.68
CDH13P55290 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH13P55290 RNA5SP146-201ENST00000410743 123 ntBASIC4.55□□□□□ -1.68
CDH13P55290 AC009237.10-201ENST00000414112 510 ntBASIC4.55□□□□□ -1.68
CDH13P55290 CYCSP10-201ENST00000417973 294 ntBASIC4.55□□□□□ -1.68
CDH13P55290 AL590609.2-201ENST00000421430 368 ntBASIC4.55□□□□□ -1.68
CDH13P55290 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH13P55290 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH13P55290 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH13P55290 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH13P55290 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH13P55290 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH13P55290 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH13P55290 AL050341.1-201ENST00000447743 313 ntBASIC4.55□□□□□ -1.68
CDH13P55290 OR51B8P-201ENST00000449892 769 ntBASIC4.55□□□□□ -1.68
CDH13P55290 OR52J1P-201ENST00000450596 932 ntBASIC4.55□□□□□ -1.68
CDH13P55290 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH13P55290 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH13P55290 SCARNA21.2-201ENST00000516600 166 ntBASIC4.55□□□□□ -1.68
CDH13P55290 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH13P55290 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH13P55290 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH13P55290 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH13P55290 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH13P55290 RPL21P7-201ENST00000557463 483 ntBASIC4.55□□□□□ -1.68
CDH13P55290 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH13P55290 AP000919.1-202ENST00000581139 1264 ntBASIC4.55□□□□□ -1.68
CDH13P55290 AL512427.1-201ENST00000618593 349 ntBASIC4.55□□□□□ -1.68
CDH13P55290 AC009269.6-201ENST00000621778 588 ntBASIC4.55□□□□□ -1.68
CDH13P55290 AC140113.4-201ENST00000622087 222 ntBASIC4.55□□□□□ -1.68
CDH13P55290 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
CDH13P55290 AC004808.1-201ENST00000627671 721 ntBASIC4.55□□□□□ -1.68
CDH13P55290 AL590396.2-201ENST00000636511 1041 ntBASIC4.55□□□□□ -1.68
CDH13P55290 AC017104.5-201ENST00000637647 639 ntBASIC4.55□□□□□ -1.68
CDH13P55290 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH13P55290 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH13P55290 AL049737.1-201ENST00000413920 1403 ntBASIC4.55□□□□□ -1.68
CDH13P55290 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH13P55290 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH13P55290 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH13P55290 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CDH13P55290 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH13P55290 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH13P55290 AC093535.2-201ENST00000624769 2326 ntBASIC4.54□□□□□ -1.68
CDH13P55290 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH13P55290 RNA5SP191-201ENST00000362585 102 ntBASIC4.54□□□□□ -1.68
CDH13P55290 RNU6-146P-201ENST00000384602 108 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH13P55290 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH13P55290 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH13P55290 RNU2-65P-201ENST00000410162 185 ntBASIC4.54□□□□□ -1.68
CDH13P55290 RN7SKP213-201ENST00000410746 298 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AL591848.1-201ENST00000413092 322 ntBASIC4.54□□□□□ -1.68
CDH13P55290 CEACAMP8-201ENST00000413902 580 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AC234782.4-201ENST00000417646 1048 ntBASIC4.54□□□□□ -1.68
CDH13P55290 RPL12P34-201ENST00000424532 479 ntBASIC4.54□□□□□ -1.68
CDH13P55290 RPL21P43-201ENST00000425440 472 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AL158073.1-201ENST00000426848 1104 ntBASIC4.54□□□□□ -1.68
CDH13P55290 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH13P55290 AC011242.1-201ENST00000433596 1158 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH13P55290 AC092809.1-201ENST00000441469 474 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AC239809.1-201ENST00000450470 217 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AC005008.1-201ENST00000456151 612 ntBASIC4.54□□□□□ -1.68
CDH13P55290 RPS5P7-201ENST00000456664 608 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AC090142.1-201ENST00000465776 462 ntBASIC4.54□□□□□ -1.68
CDH13P55290 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH13P55290 RN7SL817P-201ENST00000480777 288 ntBASIC4.54□□□□□ -1.68
CDH13P55290 HPRT1P2-201ENST00000505250 544 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AC069306.1-201ENST00000507006 843 ntBASIC4.54□□□□□ -1.68
CDH13P55290 PRELID3BP4-201ENST00000515476 571 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AC134698.5-201ENST00000519444 336 ntBASIC4.54□□□□□ -1.68
CDH13P55290 SMARCE1P4-201ENST00000523647 241 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AC124293.1-201ENST00000530034 493 ntBASIC4.54□□□□□ -1.68
CDH13P55290 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH13P55290 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.54□□□□□ -1.68
CDH13P55290 CYB5AP5-201ENST00000549779 389 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH13P55290 RN7SL176P-201ENST00000580352 264 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AC110743.1-201ENST00000584870 478 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH13P55290 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH13P55290 AC087763.1-201ENST00000603391 286 ntBASIC4.54□□□□□ -1.68
CDH13P55290 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
CDH13P55290 AC099785.1-201ENST00000605697 437 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AL445222.1-201ENST00000607259 628 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AC112503.1-201ENST00000608436 391 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AC022079.2-201ENST00000619739 566 ntBASIC4.54□□□□□ -1.68
CDH13P55290 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH13P55290 AC092608.3-201ENST00000625017 386 ntBASIC4.54□□□□□ -1.68
CDH13P55290 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH13P55290 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
CDH13P55290 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms