Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC098935.2-201ENST00000604222 466 ntBASIC5.36□□□□□ -1.55
NEK3P51956 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.36□□□□□ -1.55
NEK3P51956 AP002782.1-201ENST00000623107 614 ntBASIC5.36□□□□□ -1.55
NEK3P51956 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NEK3P51956 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NEK3P51956 Z99496.1-201ENST00000469424 1477 ntBASIC5.36□□□□□ -1.55
NEK3P51956 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NEK3P51956 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
NEK3P51956 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NEK3P51956 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.36□□□□□ -1.55
NEK3P51956 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
NEK3P51956 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
NEK3P51956 AC104623.2-202ENST00000623477 4002 ntBASIC5.36□□□□□ -1.55
NEK3P51956 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
NEK3P51956 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NEK3P51956 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NEK3P51956 MFSD8-220ENST00000641243 1422 ntBASIC5.35□□□□□ -1.55
NEK3P51956 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.35□□□□□ -1.55
NEK3P51956 RN7SKP74-201ENST00000362849 309 ntBASIC5.35□□□□□ -1.55
NEK3P51956 SNORA17.1-201ENST00000362945 126 ntBASIC5.35□□□□□ -1.55
NEK3P51956 RNU6-582P-201ENST00000362989 107 ntBASIC5.35□□□□□ -1.55
NEK3P51956 U8.4-201ENST00000363626 134 ntBASIC5.35□□□□□ -1.55
NEK3P51956 RNU4-28P-201ENST00000364739 141 ntBASIC5.35□□□□□ -1.55
NEK3P51956 SNORD65.1-201ENST00000390889 71 ntBASIC5.35□□□□□ -1.55
NEK3P51956 DSTNP4-201ENST00000399472 474 ntBASIC5.35□□□□□ -1.55
NEK3P51956 AP002530.1-201ENST00000405705 684 ntBASIC5.35□□□□□ -1.55
NEK3P51956 FCF1P5-201ENST00000406490 482 ntBASIC5.35□□□□□ -1.55
NEK3P51956 RN7SKP213-201ENST00000410746 298 ntBASIC5.35□□□□□ -1.55
NEK3P51956 RPL23AP27-201ENST00000415161 451 ntBASIC5.35□□□□□ -1.55
NEK3P51956 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.35□□□□□ -1.55
NEK3P51956 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.35□□□□□ -1.55
NEK3P51956 HMGB3P5-201ENST00000428894 612 ntBASIC5.35□□□□□ -1.55
NEK3P51956 IFNNP1-201ENST00000429219 553 ntBASIC5.35□□□□□ -1.55
NEK3P51956 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.35□□□□□ -1.55
NEK3P51956 PTMAP6-201ENST00000439110 327 ntBASIC5.35□□□□□ -1.55
NEK3P51956 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.35□□□□□ -1.55
NEK3P51956 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.35□□□□□ -1.55
NEK3P51956 NOP56P2-201ENST00000447491 769 ntBASIC5.35□□□□□ -1.55
NEK3P51956 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.35□□□□□ -1.55
NEK3P51956 AC104634.1-201ENST00000452720 462 ntBASIC5.35□□□□□ -1.55
NEK3P51956 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.35□□□□□ -1.55
NEK3P51956 KLRA1P-201ENST00000503499 986 ntBASIC5.35□□□□□ -1.55
NEK3P51956 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.35□□□□□ -1.55
NEK3P51956 AC025674.1-201ENST00000507074 324 ntBASIC5.35□□□□□ -1.55
NEK3P51956 AC110792.2-201ENST00000510278 224 ntBASIC5.35□□□□□ -1.55
NEK3P51956 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
NEK3P51956 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.35□□□□□ -1.55
NEK3P51956 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.35□□□□□ -1.55
NEK3P51956 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 AC074051.3-201ENST00000570238 358 ntBASIC5.35□□□□□ -1.55
NEK3P51956 HNRNPCP4-201ENST00000571636 900 ntBASIC5.35□□□□□ -1.55
NEK3P51956 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.35□□□□□ -1.55
NEK3P51956 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.35□□□□□ -1.55
NEK3P51956 MIR3936-201ENST00000584304 110 ntBASIC5.35□□□□□ -1.55
NEK3P51956 AC095055.1-201ENST00000603472 1113 ntBASIC5.35□□□□□ -1.55
NEK3P51956 TAS2R6P-201ENST00000605022 826 ntBASIC5.35□□□□□ -1.55
NEK3P51956 AC023158.2-201ENST00000614876 543 ntBASIC5.35□□□□□ -1.55
NEK3P51956 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 AC026634.1-201ENST00000634369 198 ntBASIC5.35□□□□□ -1.55
NEK3P51956 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NEK3P51956 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NEK3P51956 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NEK3P51956 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NEK3P51956 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
NEK3P51956 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NEK3P51956 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NEK3P51956 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.35□□□□□ -1.55
NEK3P51956 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.35□□□□□ -1.55
NEK3P51956 AL049555.1-201ENST00000562834 1933 ntBASIC5.35□□□□□ -1.55
NEK3P51956 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
NEK3P51956 AC100778.3-201ENST00000580060 1750 ntBASIC5.34□□□□□ -1.55
NEK3P51956 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NEK3P51956 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NEK3P51956 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
NEK3P51956 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NEK3P51956 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NEK3P51956 MTND5P28-201ENST00000438005 1594 ntBASIC5.34□□□□□ -1.55
NEK3P51956 ECM1P2-201ENST00000503354 1577 ntBASIC5.34□□□□□ -1.55
NEK3P51956 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NEK3P51956 MTND5P31-201ENST00000419366 1374 ntBASIC5.34□□□□□ -1.55
NEK3P51956 AL139811.1-201ENST00000424779 2299 ntBASIC5.34□□□□□ -1.55
NEK3P51956 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
NEK3P51956 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
NEK3P51956 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NEK3P51956 SUGT1P1-201ENST00000379514 476 ntBASIC5.34□□□□□ -1.55
NEK3P51956 RNU6-1300P-201ENST00000391046 108 ntBASIC5.34□□□□□ -1.55
NEK3P51956 MTCO3P31-201ENST00000405526 789 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms