Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LHX1P48742 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.71□□□□□ -1.66
LHX1P48742 MIR6810-201ENST00000622701 70 ntBASIC4.71□□□□□ -1.66
LHX1P48742 AC024023.1-201ENST00000624530 922 ntBASIC4.71□□□□□ -1.66
LHX1P48742 AP001642.1-201ENST00000624727 2117 ntBASIC4.71□□□□□ -1.66
LHX1P48742 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LHX1P48742 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LHX1P48742 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LHX1P48742 MTCO1P4-201ENST00000520516 1409 ntBASIC4.71□□□□□ -1.66
LHX1P48742 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LHX1P48742 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LHX1P48742 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LHX1P48742 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LHX1P48742 RNA5SP151-201ENST00000365632 117 ntBASIC4.7□□□□□ -1.66
LHX1P48742 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LHX1P48742 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.7□□□□□ -1.66
LHX1P48742 AC011933.1-201ENST00000413334 321 ntBASIC4.7□□□□□ -1.66
LHX1P48742 P2RY10P2-201ENST00000416730 913 ntBASIC4.7□□□□□ -1.66
LHX1P48742 MTCO3P4-201ENST00000419236 787 ntBASIC4.7□□□□□ -1.66
LHX1P48742 GAPDHP49-201ENST00000421421 961 ntBASIC4.7□□□□□ -1.66
LHX1P48742 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.7□□□□□ -1.66
LHX1P48742 PPIAP13-201ENST00000434706 478 ntBASIC4.7□□□□□ -1.66
LHX1P48742 AC092447.2-201ENST00000435487 669 ntBASIC4.7□□□□□ -1.66
LHX1P48742 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.7□□□□□ -1.66
LHX1P48742 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.7□□□□□ -1.66
LHX1P48742 UBE2V1P3-201ENST00000439651 417 ntBASIC4.7□□□□□ -1.66
LHX1P48742 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.7□□□□□ -1.66
LHX1P48742 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LHX1P48742 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LHX1P48742 RPL7P55-201ENST00000450522 746 ntBASIC4.7□□□□□ -1.66
LHX1P48742 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LHX1P48742 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LHX1P48742 DDX39BP2-208ENST00000453923 258 ntBASIC4.7□□□□□ -1.66
LHX1P48742 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.7□□□□□ -1.66
LHX1P48742 RPL7AP52-201ENST00000458096 790 ntBASIC4.7□□□□□ -1.66
LHX1P48742 AC116533.1-201ENST00000459748 321 ntBASIC4.7□□□□□ -1.66
LHX1P48742 AC092905.1-201ENST00000467527 949 ntBASIC4.7□□□□□ -1.66
LHX1P48742 RN7SL860P-201ENST00000473738 223 ntBASIC4.7□□□□□ -1.66
LHX1P48742 AC092902.1-201ENST00000486999 259 ntBASIC4.7□□□□□ -1.66
LHX1P48742 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.7□□□□□ -1.66
LHX1P48742 AC026979.1-201ENST00000492525 396 ntBASIC4.7□□□□□ -1.66
LHX1P48742 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.7□□□□□ -1.66
LHX1P48742 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.7□□□□□ -1.66
LHX1P48742 AC112518.2-201ENST00000508565 425 ntBASIC4.7□□□□□ -1.66
LHX1P48742 snoU109.6-201ENST00000516831 118 ntBASIC4.7□□□□□ -1.66
LHX1P48742 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.7□□□□□ -1.66
LHX1P48742 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.7□□□□□ -1.66
LHX1P48742 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.7□□□□□ -1.66
LHX1P48742 AC090525.3-201ENST00000605601 189 ntBASIC4.7□□□□□ -1.66
LHX1P48742 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.7□□□□□ -1.66
LHX1P48742 AC006338.2-201ENST00000616864 791 ntBASIC4.7□□□□□ -1.66
LHX1P48742 MIR6758-201ENST00000620653 63 ntBASIC4.7□□□□□ -1.66
LHX1P48742 AC011944.2-201ENST00000624440 683 ntBASIC4.7□□□□□ -1.66
LHX1P48742 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.7□□□□□ -1.66
LHX1P48742 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LHX1P48742 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LHX1P48742 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LHX1P48742 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.7□□□□□ -1.66
LHX1P48742 EIF2AP4-201ENST00000424793 1781 ntBASIC4.7□□□□□ -1.66
LHX1P48742 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.7□□□□□ -1.66
LHX1P48742 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LHX1P48742 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LHX1P48742 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LHX1P48742 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.69□□□□□ -1.66
LHX1P48742 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LHX1P48742 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.69□□□□□ -1.66
LHX1P48742 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.69□□□□□ -1.66
LHX1P48742 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LHX1P48742 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.69□□□□□ -1.66
LHX1P48742 RPL32P3-201ENST00000359025 275 ntBASIC4.69□□□□□ -1.66
LHX1P48742 MIR331-201ENST00000362302 94 ntBASIC4.69□□□□□ -1.66
LHX1P48742 RNA5SP307-201ENST00000362863 116 ntBASIC4.69□□□□□ -1.66
LHX1P48742 UBE2V1P11-201ENST00000411559 285 ntBASIC4.69□□□□□ -1.66
LHX1P48742 AC004690.1-201ENST00000418216 328 ntBASIC4.69□□□□□ -1.66
LHX1P48742 AL139095.3-201ENST00000419672 1203 ntBASIC4.69□□□□□ -1.66
LHX1P48742 PNRC2P1-201ENST00000423940 420 ntBASIC4.69□□□□□ -1.66
LHX1P48742 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.69□□□□□ -1.66
LHX1P48742 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.69□□□□□ -1.66
LHX1P48742 NPM1P39-201ENST00000449818 867 ntBASIC4.69□□□□□ -1.66
LHX1P48742 MTND2P39-201ENST00000457230 764 ntBASIC4.69□□□□□ -1.66
LHX1P48742 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.69□□□□□ -1.66
LHX1P48742 AC133963.2-201ENST00000513686 578 ntBASIC4.69□□□□□ -1.66
LHX1P48742 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.69□□□□□ -1.66
LHX1P48742 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.69□□□□□ -1.66
LHX1P48742 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.69□□□□□ -1.66
LHX1P48742 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.69□□□□□ -1.66
LHX1P48742 NPM1P47-201ENST00000560843 856 ntBASIC4.69□□□□□ -1.66
LHX1P48742 AC027455.1-201ENST00000574104 594 ntBASIC4.69□□□□□ -1.66
LHX1P48742 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.69□□□□□ -1.66
LHX1P48742 MIR548Y-201ENST00000582739 110 ntBASIC4.69□□□□□ -1.66
LHX1P48742 AC018618.2-201ENST00000604770 446 ntBASIC4.69□□□□□ -1.66
LHX1P48742 AC079610.2-201ENST00000604818 690 ntBASIC4.69□□□□□ -1.66
LHX1P48742 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LHX1P48742 AC083809.1-201ENST00000615051 472 ntBASIC4.69□□□□□ -1.66
LHX1P48742 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.69□□□□□ -1.66
LHX1P48742 AC106858.1-201ENST00000637497 429 ntBASIC4.69□□□□□ -1.66
LHX1P48742 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LHX1P48742 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LHX1P48742 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LHX1P48742 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms