Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSR1P43307 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSR1P43307 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SSR1P43307 CPHL1P-201ENST00000461341 3407 ntBASIC4.68□□□□□ -1.66
SSR1P43307 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SSR1P43307 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SSR1P43307 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSR1P43307 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSR1P43307 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSR1P43307 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.68□□□□□ -1.66
SSR1P43307 RN7SKP167-201ENST00000411047 285 ntBASIC4.68□□□□□ -1.66
SSR1P43307 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.68□□□□□ -1.66
SSR1P43307 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.68□□□□□ -1.66
SSR1P43307 NPM1P26-201ENST00000426339 738 ntBASIC4.68□□□□□ -1.66
SSR1P43307 CDY14P-201ENST00000431260 1014 ntBASIC4.68□□□□□ -1.66
SSR1P43307 UBE2V2P1-201ENST00000434717 398 ntBASIC4.68□□□□□ -1.66
SSR1P43307 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSR1P43307 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.68□□□□□ -1.66
SSR1P43307 CDY12P-201ENST00000440679 1015 ntBASIC4.68□□□□□ -1.66
SSR1P43307 CDY13P-201ENST00000445813 1015 ntBASIC4.68□□□□□ -1.66
SSR1P43307 CDY23P-201ENST00000451661 1014 ntBASIC4.68□□□□□ -1.66
SSR1P43307 CEACAMP6-201ENST00000452007 574 ntBASIC4.68□□□□□ -1.66
SSR1P43307 AP000873.1-201ENST00000463987 400 ntBASIC4.68□□□□□ -1.66
SSR1P43307 LARP7P4-201ENST00000481075 878 ntBASIC4.68□□□□□ -1.66
SSR1P43307 AC105233.1-201ENST00000498840 781 ntBASIC4.68□□□□□ -1.66
SSR1P43307 AC139783.2-201ENST00000504847 1145 ntBASIC4.68□□□□□ -1.66
SSR1P43307 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.68□□□□□ -1.66
SSR1P43307 Vault.1-201ENST00000516474 102 ntBASIC4.68□□□□□ -1.66
SSR1P43307 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.68□□□□□ -1.66
SSR1P43307 MIR4480-201ENST00000582492 71 ntBASIC4.68□□□□□ -1.66
SSR1P43307 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.68□□□□□ -1.66
SSR1P43307 AC010680.4-201ENST00000605334 543 ntBASIC4.68□□□□□ -1.66
SSR1P43307 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.68□□□□□ -1.66
SSR1P43307 AL353726.1-201ENST00000614041 1000 ntBASIC4.68□□□□□ -1.66
SSR1P43307 AC007546.2-201ENST00000623996 360 ntBASIC4.68□□□□□ -1.66
SSR1P43307 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSR1P43307 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSR1P43307 LINC00622-201ENST00000562811 1570 ntBASIC4.68□□□□□ -1.66
SSR1P43307 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSR1P43307 AC016588.2-201ENST00000632484 3021 ntBASIC4.68□□□□□ -1.66
SSR1P43307 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSR1P43307 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSR1P43307 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SSR1P43307 HSPA8P1-201ENST00000425843 1833 ntBASIC4.67□□□□□ -1.66
SSR1P43307 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSR1P43307 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.67□□□□□ -1.66
SSR1P43307 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SSR1P43307 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSR1P43307 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSR1P43307 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.67□□□□□ -1.66
SSR1P43307 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSR1P43307 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SSR1P43307 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSR1P43307 AC067945.1-201ENST00000342609 618 ntBASIC4.67□□□□□ -1.66
SSR1P43307 RNU6-386P-201ENST00000362650 107 ntBASIC4.67□□□□□ -1.66
SSR1P43307 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSR1P43307 MIR659-201ENST00000384963 97 ntBASIC4.67□□□□□ -1.66
SSR1P43307 AL035419.1-201ENST00000397037 564 ntBASIC4.67□□□□□ -1.66
SSR1P43307 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.67□□□□□ -1.66
SSR1P43307 MTCYBP7-201ENST00000419540 1134 ntBASIC4.67□□□□□ -1.66
SSR1P43307 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.67□□□□□ -1.66
SSR1P43307 OR6K4P-201ENST00000423179 955 ntBASIC4.67□□□□□ -1.66
SSR1P43307 MTND2P11-201ENST00000423638 648 ntBASIC4.67□□□□□ -1.66
SSR1P43307 AC115285.1-201ENST00000424879 736 ntBASIC4.67□□□□□ -1.66
SSR1P43307 AC234779.1-201ENST00000425910 285 ntBASIC4.67□□□□□ -1.66
SSR1P43307 AP001324.1-201ENST00000428553 399 ntBASIC4.67□□□□□ -1.66
SSR1P43307 AL049745.1-201ENST00000433953 286 ntBASIC4.67□□□□□ -1.66
SSR1P43307 RPL23AP43-201ENST00000446445 471 ntBASIC4.67□□□□□ -1.66
SSR1P43307 ARL2BPP10-201ENST00000446487 531 ntBASIC4.67□□□□□ -1.66
SSR1P43307 AC069277.2-201ENST00000454211 432 ntBASIC4.67□□□□□ -1.66
SSR1P43307 TVP23BP2-201ENST00000455082 615 ntBASIC4.67□□□□□ -1.66
SSR1P43307 AC010326.1-201ENST00000462726 602 ntBASIC4.67□□□□□ -1.66
SSR1P43307 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.67□□□□□ -1.66
SSR1P43307 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.67□□□□□ -1.66
SSR1P43307 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.67□□□□□ -1.66
SSR1P43307 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.67□□□□□ -1.66
SSR1P43307 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.67□□□□□ -1.66
SSR1P43307 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.67□□□□□ -1.66
SSR1P43307 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.67□□□□□ -1.66
SSR1P43307 AC100770.1-201ENST00000532310 322 ntBASIC4.67□□□□□ -1.66
SSR1P43307 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.67□□□□□ -1.66
SSR1P43307 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.67□□□□□ -1.66
SSR1P43307 AC069061.3-201ENST00000582254 823 ntBASIC4.67□□□□□ -1.66
SSR1P43307 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.67□□□□□ -1.66
SSR1P43307 AC008759.1-201ENST00000589783 983 ntBASIC4.67□□□□□ -1.66
SSR1P43307 SNX6P1-201ENST00000601728 1224 ntBASIC4.67□□□□□ -1.66
SSR1P43307 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.67□□□□□ -1.66
SSR1P43307 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.67□□□□□ -1.66
SSR1P43307 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSR1P43307 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.67□□□□□ -1.66
SSR1P43307 MFSD8-242ENST00000641690 4199 ntBASIC4.67□□□□□ -1.66
SSR1P43307 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SSR1P43307 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSR1P43307 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.66□□□□□ -1.66
SSR1P43307 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SSR1P43307 RNA5SP22-201ENST00000365393 109 ntBASIC4.66□□□□□ -1.66
SSR1P43307 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSR1P43307 SDHCP2-201ENST00000398565 501 ntBASIC4.66□□□□□ -1.66
SSR1P43307 AL049697.2-201ENST00000403708 294 ntBASIC4.66□□□□□ -1.66
SSR1P43307 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms