Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.18□□□□□ -1.74
HTTP42858 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HTTP42858 AC008966.2-201ENST00000606157 453 ntBASIC4.18□□□□□ -1.74
HTTP42858 RNA5SP439-201ENST00000617595 124 ntBASIC4.18□□□□□ -1.74
HTTP42858 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HTTP42858 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HTTP42858 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HTTP42858 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HTTP42858 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HTTP42858 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HTTP42858 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.18□□□□□ -1.74
HTTP42858 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HTTP42858 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HTTP42858 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HTTP42858 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HTTP42858 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HTTP42858 PGBD4P8-201ENST00000412993 562 ntBASIC4.18□□□□□ -1.74
HTTP42858 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HTTP42858 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.18□□□□□ -1.74
HTTP42858 AC004924.1-201ENST00000480160 781 ntBASIC4.18□□□□□ -1.74
HTTP42858 RPL32P34-201ENST00000486380 400 ntBASIC4.18□□□□□ -1.74
HTTP42858 RNA5SP230-201ENST00000517039 122 ntBASIC4.18□□□□□ -1.74
HTTP42858 AC006386.2-201ENST00000624491 75 ntBASIC4.18□□□□□ -1.74
HTTP42858 AC012005.1-201ENST00000624575 75 ntBASIC4.18□□□□□ -1.74
HTTP42858 AC073073.2-201ENST00000609827 2578 ntBASIC4.18□□□□□ -1.74
HTTP42858 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.18□□□□□ -1.74
HTTP42858 AC068254.2-201ENST00000623938 3577 ntBASIC4.18□□□□□ -1.74
HTTP42858 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HTTP42858 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HTTP42858 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.17□□□□□ -1.74
HTTP42858 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
HTTP42858 BX323014.1-201ENST00000412876 237 ntBASIC4.17□□□□□ -1.74
HTTP42858 AC008065.1-201ENST00000428525 348 ntBASIC4.17□□□□□ -1.74
HTTP42858 RPL21P10-201ENST00000463521 490 ntBASIC4.17□□□□□ -1.74
HTTP42858 CR383656.14-201ENST00000551951 406 ntBASIC4.17□□□□□ -1.74
HTTP42858 AC012417.1-201ENST00000582307 1039 ntBASIC4.17□□□□□ -1.74
HTTP42858 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.17□□□□□ -1.74
HTTP42858 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.17□□□□□ -1.74
HTTP42858 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.17□□□□□ -1.74
HTTP42858 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC4.17□□□□□ -1.74
HTTP42858 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.17□□□□□ -1.74
HTTP42858 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.17□□□□□ -1.74
HTTP42858 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.17□□□□□ -1.74
HTTP42858 AL139089.1-201ENST00000620372 975 ntBASIC4.17□□□□□ -1.74
HTTP42858 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.17□□□□□ -1.74
HTTP42858 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 AC004944.1-201ENST00000517807 3059 ntBASIC4.17□□□□□ -1.74
HTTP42858 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 RPL27AP5-201ENST00000469428 449 ntBASIC4.17□□□□□ -1.74
HTTP42858 RPL23AP65-201ENST00000475608 468 ntBASIC4.17□□□□□ -1.74
HTTP42858 AC093663.1-201ENST00000497190 394 ntBASIC4.17□□□□□ -1.74
HTTP42858 FTH1P24-201ENST00000503502 462 ntBASIC4.17□□□□□ -1.74
HTTP42858 HMGB3P16-201ENST00000508037 287 ntBASIC4.17□□□□□ -1.74
HTTP42858 SNORA70.18-201ENST00000516696 98 ntBASIC4.17□□□□□ -1.74
HTTP42858 PHBP17-201ENST00000528576 541 ntBASIC4.17□□□□□ -1.74
HTTP42858 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.17□□□□□ -1.74
HTTP42858 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.17□□□□□ -1.74
HTTP42858 AL606834.2-201ENST00000602954 668 ntBASIC4.17□□□□□ -1.74
HTTP42858 AL354976.1-201ENST00000613843 387 ntBASIC4.17□□□□□ -1.74
HTTP42858 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC4.17□□□□□ -1.74
HTTP42858 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
HTTP42858 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HTTP42858 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HTTP42858 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HTTP42858 OTUD4P1-201ENST00000237841 3067 ntBASIC4.16□□□□□ -1.74
HTTP42858 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HTTP42858 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HTTP42858 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HTTP42858 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
HTTP42858 IL6STP1-201ENST00000346911 1020 ntBASIC4.16□□□□□ -1.74
HTTP42858 OR2AH1P-201ENST00000425717 928 ntBASIC4.16□□□□□ -1.74
HTTP42858 RPL5P2-201ENST00000429598 854 ntBASIC4.16□□□□□ -1.74
HTTP42858 RPL23AP25-201ENST00000430973 463 ntBASIC4.16□□□□□ -1.74
HTTP42858 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.16□□□□□ -1.74
HTTP42858 AC091862.1-201ENST00000438016 1100 ntBASIC4.16□□□□□ -1.74
HTTP42858 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.16□□□□□ -1.74
HTTP42858 RPL7P24-201ENST00000493052 752 ntBASIC4.16□□□□□ -1.74
HTTP42858 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.16□□□□□ -1.74
HTTP42858 RPL12P50-201ENST00000603116 116 ntBASIC4.16□□□□□ -1.74
HTTP42858 BNIP3P10-201ENST00000605360 577 ntBASIC4.16□□□□□ -1.74
HTTP42858 MIR7106-201ENST00000612419 65 ntBASIC4.16□□□□□ -1.74
HTTP42858 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.16□□□□□ -1.74
HTTP42858 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HTTP42858 HNRNPA1P54-201ENST00000411857 9714 ntBASIC4.16□□□□□ -1.74
HTTP42858 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HTTP42858 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.16□□□□□ -1.74
HTTP42858 RNA5SP306-201ENST00000411087 107 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms