Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFC4P35249 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.24□□□□□ -1.57
RFC4P35249 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.23□□□□□ -1.57
RFC4P35249 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RFC4P35249 THAP12P8-201ENST00000447914 2115 ntBASIC5.23□□□□□ -1.57
RFC4P35249 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFC4P35249 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.23□□□□□ -1.57
RFC4P35249 SNORD66.1-201ENST00000391230 76 ntBASIC5.23□□□□□ -1.57
RFC4P35249 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RFC4P35249 SNORA57.3-201ENST00000411095 141 ntBASIC5.23□□□□□ -1.57
RFC4P35249 OR5BE1P-201ENST00000425977 939 ntBASIC5.23□□□□□ -1.57
RFC4P35249 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.23□□□□□ -1.57
RFC4P35249 AC006011.1-201ENST00000442758 349 ntBASIC5.23□□□□□ -1.57
RFC4P35249 OR9M1P-201ENST00000459641 921 ntBASIC5.23□□□□□ -1.57
RFC4P35249 RPL7P1-201ENST00000468161 747 ntBASIC5.23□□□□□ -1.57
RFC4P35249 RPL7P9-201ENST00000468715 747 ntBASIC5.23□□□□□ -1.57
RFC4P35249 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.23□□□□□ -1.57
RFC4P35249 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RFC4P35249 RNA5SP360-201ENST00000516555 118 ntBASIC5.23□□□□□ -1.57
RFC4P35249 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.23□□□□□ -1.57
RFC4P35249 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.23□□□□□ -1.57
RFC4P35249 SULT1C2P2-201ENST00000562517 294 ntBASIC5.23□□□□□ -1.57
RFC4P35249 AC234775.3-201ENST00000564612 656 ntBASIC5.23□□□□□ -1.57
RFC4P35249 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.23□□□□□ -1.57
RFC4P35249 MTND2P13-201ENST00000577438 1039 ntBASIC5.23□□□□□ -1.57
RFC4P35249 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.23□□□□□ -1.57
RFC4P35249 SRGNP1-201ENST00000603392 451 ntBASIC5.23□□□□□ -1.57
RFC4P35249 AC005034.4-201ENST00000603612 899 ntBASIC5.23□□□□□ -1.57
RFC4P35249 AC007179.3-201ENST00000604976 235 ntBASIC5.23□□□□□ -1.57
RFC4P35249 AC023813.4-201ENST00000607580 580 ntBASIC5.23□□□□□ -1.57
RFC4P35249 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.23□□□□□ -1.57
RFC4P35249 OR5BE1P-202ENST00000641168 1176 ntBASIC5.23□□□□□ -1.57
RFC4P35249 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RFC4P35249 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFC4P35249 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.23□□□□□ -1.57
RFC4P35249 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.23□□□□□ -1.57
RFC4P35249 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RFC4P35249 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFC4P35249 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFC4P35249 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.23□□□□□ -1.57
RFC4P35249 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.23□□□□□ -1.57
RFC4P35249 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFC4P35249 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
RFC4P35249 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFC4P35249 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFC4P35249 RN7SKP74-201ENST00000362849 309 ntBASIC5.22□□□□□ -1.57
RFC4P35249 MIR30B-201ENST00000384850 88 ntBASIC5.22□□□□□ -1.57
RFC4P35249 RN7SKP156-201ENST00000410308 342 ntBASIC5.22□□□□□ -1.57
RFC4P35249 AL450263.2-201ENST00000439400 589 ntBASIC5.22□□□□□ -1.57
RFC4P35249 RPS4XP4-201ENST00000443195 763 ntBASIC5.22□□□□□ -1.57
RFC4P35249 AL133244.1-201ENST00000456007 258 ntBASIC5.22□□□□□ -1.57
RFC4P35249 EIF4EP5-201ENST00000528228 640 ntBASIC5.22□□□□□ -1.57
RFC4P35249 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RFC4P35249 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.22□□□□□ -1.57
RFC4P35249 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.22□□□□□ -1.57
RFC4P35249 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFC4P35249 AC234782.5-201ENST00000617723 324 ntBASIC5.22□□□□□ -1.57
RFC4P35249 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RFC4P35249 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.22□□□□□ -1.57
RFC4P35249 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFC4P35249 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFC4P35249 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFC4P35249 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.21□□□□□ -1.57
RFC4P35249 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
RFC4P35249 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFC4P35249 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFC4P35249 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFC4P35249 OR4A15-201ENST00000314706 1035 ntBASIC5.21□□□□□ -1.58
RFC4P35249 RNU1-44P-201ENST00000384453 163 ntBASIC5.21□□□□□ -1.58
RFC4P35249 SNORA68.2-201ENST00000391263 128 ntBASIC5.21□□□□□ -1.58
RFC4P35249 AL078604.1-201ENST00000404609 466 ntBASIC5.21□□□□□ -1.58
RFC4P35249 MIR1179-201ENST00000408703 91 ntBASIC5.21□□□□□ -1.58
RFC4P35249 RPL36AP10-201ENST00000421785 322 ntBASIC5.21□□□□□ -1.58
RFC4P35249 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.21□□□□□ -1.58
RFC4P35249 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.21□□□□□ -1.58
RFC4P35249 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.21□□□□□ -1.58
RFC4P35249 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.21□□□□□ -1.58
RFC4P35249 AC022431.1-201ENST00000450941 438 ntBASIC5.21□□□□□ -1.58
RFC4P35249 USP9YP2-201ENST00000504503 1000 ntBASIC5.21□□□□□ -1.58
RFC4P35249 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.21□□□□□ -1.58
RFC4P35249 USP9YP1-201ENST00000513521 1002 ntBASIC5.21□□□□□ -1.58
RFC4P35249 DUXAP2-201ENST00000519198 589 ntBASIC5.21□□□□□ -1.58
RFC4P35249 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.21□□□□□ -1.58
RFC4P35249 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.21□□□□□ -1.58
RFC4P35249 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.21□□□□□ -1.58
RFC4P35249 SETP1-201ENST00000556014 845 ntBASIC5.21□□□□□ -1.58
RFC4P35249 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.21□□□□□ -1.58
RFC4P35249 BNIP3P41-202ENST00000616656 861 ntBASIC5.21□□□□□ -1.58
RFC4P35249 AC009093.8-201ENST00000641769 292 ntBASIC5.21□□□□□ -1.58
RFC4P35249 HSPD1P14-201ENST00000432666 1618 ntBASIC5.21□□□□□ -1.58
RFC4P35249 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.21□□□□□ -1.58
RFC4P35249 ZNF285B-201ENST00000561698 1767 ntBASIC5.21□□□□□ -1.58
RFC4P35249 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFC4P35249 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.21□□□□□ -1.58
RFC4P35249 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.21□□□□□ -1.58
RFC4P35249 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.21□□□□□ -1.58
RFC4P35249 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFC4P35249 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFC4P35249 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.2□□□□□ -1.58
RFC4P35249 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms