Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.39□□□□□ -1.55
TM4SF1P30408 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.39□□□□□ -1.55
TM4SF1P30408 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF1P30408 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF1P30408 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF1P30408 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF1P30408 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF1P30408 AC092162.3-201ENST00000624511 1624 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF1P30408 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TM4SF1P30408 RNU6-249P-201ENST00000363016 102 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 AL592291.1-201ENST00000403830 352 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 AP000357.1-201ENST00000409926 1165 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 RNU4-74P-201ENST00000411280 161 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 UBE2V1P11-201ENST00000411559 285 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 RPS3AP25-201ENST00000411660 793 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 RPS20P14-201ENST00000412545 360 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 AC108032.1-201ENST00000416706 207 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.39□□□□□ -1.55
TM4SF1P30408 MTND2P2-201ENST00000434633 945 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.39□□□□□ -1.55
TM4SF1P30408 RPL23AP81-201ENST00000455252 467 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 NPM1P29-201ENST00000483112 803 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 AC020890.1-201ENST00000491837 504 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.39□□□□□ -1.55
TM4SF1P30408 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.39□□□□□ -1.55
TM4SF1P30408 CR383656.14-201ENST00000551951 406 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.39□□□□□ -1.55
TM4SF1P30408 HSPE1P5-201ENST00000561489 272 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.39□□□□□ -1.55
TM4SF1P30408 MIR3908-201ENST00000579798 126 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.39□□□□□ -1.55
TM4SF1P30408 AC007546.1-201ENST00000619452 559 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 AC006249.1-201ENST00000621223 471 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF1P30408 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.39□□□□□ -1.55
TM4SF1P30408 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
TM4SF1P30408 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF1P30408 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.39□□□□□ -1.55
TM4SF1P30408 AL161912.2-201ENST00000565707 3007 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF1P30408 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF1P30408 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF1P30408 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.39□□□□□ -1.55
TM4SF1P30408 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.38□□□□□ -1.55
TM4SF1P30408 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TM4SF1P30408 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF1P30408 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF1P30408 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF1P30408 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TM4SF1P30408 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 Y_RNA.333-201ENST00000365274 102 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF1P30408 MIR449B-201ENST00000384995 97 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 MIR320B1-201ENST00000390209 79 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TM4SF1P30408 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.38□□□□□ -1.55
TM4SF1P30408 RPL21P91-201ENST00000429231 479 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 AL133547.1-201ENST00000448546 220 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.38□□□□□ -1.55
TM4SF1P30408 HMGB1P26-201ENST00000452520 628 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 EIF2S2P5-201ENST00000457635 968 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 AC078857.1-201ENST00000469870 667 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.38□□□□□ -1.55
TM4SF1P30408 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.38□□□□□ -1.55
TM4SF1P30408 RPS27AP18-201ENST00000515536 459 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.38□□□□□ -1.55
TM4SF1P30408 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.38□□□□□ -1.55
TM4SF1P30408 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.38□□□□□ -1.55
TM4SF1P30408 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.38□□□□□ -1.55
TM4SF1P30408 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.38□□□□□ -1.55
TM4SF1P30408 MIR4660-201ENST00000583549 74 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.38□□□□□ -1.55
TM4SF1P30408 AC008739.3-201ENST00000603262 127 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.38□□□□□ -1.55
TM4SF1P30408 AC023813.4-201ENST00000607580 580 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 AP002360.3-201ENST00000607673 710 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 AL109620.1-201ENST00000618738 1197 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TM4SF1P30408 AP006248.3-201ENST00000623580 594 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 FRG1DP-201ENST00000635586 771 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
TM4SF1P30408 FP325313.1-201ENST00000638228 703 ntBASIC5.38□□□□□ -1.55
TM4SF1P30408 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TM4SF1P30408 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF1P30408 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TM4SF1P30408 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF1P30408 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF1P30408 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF1P30408 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF1P30408 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM4SF1P30408 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TM4SF1P30408 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.37□□□□□ -1.55
TM4SF1P30408 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.37□□□□□ -1.55
TM4SF1P30408 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TM4SF1P30408 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.37□□□□□ -1.55
TM4SF1P30408 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TM4SF1P30408 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TM4SF1P30408 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TM4SF1P30408 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms