Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC005242.1-201ENST00000585658 438 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.11□□□□□ -1.75
SHC1P29353 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.11□□□□□ -1.75
SHC1P29353 RPL7P50-201ENST00000600588 727 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AC008745.1-201ENST00000604064 271 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AC008966.2-201ENST00000606157 453 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AP001033.2-201ENST00000609701 1003 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AC100847.1-201ENST00000611316 481 ntBASIC4.11□□□□□ -1.75
SHC1P29353 MIR6820-201ENST00000611508 62 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AL353726.1-201ENST00000614041 1000 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AL158196.1-201ENST00000616786 434 ntBASIC4.11□□□□□ -1.75
SHC1P29353 RN7SL722P-201ENST00000617780 284 ntBASIC4.11□□□□□ -1.75
SHC1P29353 RN7SL565P-201ENST00000618246 284 ntBASIC4.11□□□□□ -1.75
SHC1P29353 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.11□□□□□ -1.75
SHC1P29353 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.11□□□□□ -1.75
SHC1P29353 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SHC1P29353 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SHC1P29353 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHC1P29353 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHC1P29353 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHC1P29353 AC015813.6-201ENST00000624409 5808 ntBASIC4.11□□□□□ -1.75
SHC1P29353 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.11□□□□□ -1.75
SHC1P29353 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SHC1P29353 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHC1P29353 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
SHC1P29353 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SHC1P29353 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SHC1P29353 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.1□□□□□ -1.75
SHC1P29353 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHC1P29353 AC010132.2-201ENST00000295493 1043 ntBASIC4.1□□□□□ -1.75
SHC1P29353 OR4K15-201ENST00000305051 1216 ntBASIC4.1□□□□□ -1.75
SHC1P29353 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHC1P29353 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SHC1P29353 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SHC1P29353 RNA5SP151-201ENST00000365632 117 ntBASIC4.1□□□□□ -1.75
SHC1P29353 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.1□□□□□ -1.75
SHC1P29353 SNORA56-201ENST00000383966 129 ntBASIC4.1□□□□□ -1.75
SHC1P29353 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHC1P29353 MTCO2P8-201ENST00000412213 658 ntBASIC4.1□□□□□ -1.75
SHC1P29353 UQCRBP1-201ENST00000421129 336 ntBASIC4.1□□□□□ -1.75
SHC1P29353 EIF4EP1-201ENST00000422311 642 ntBASIC4.1□□□□□ -1.75
SHC1P29353 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.1□□□□□ -1.75
SHC1P29353 AP001324.1-201ENST00000428553 399 ntBASIC4.1□□□□□ -1.75
SHC1P29353 RPL21P91-201ENST00000429231 479 ntBASIC4.1□□□□□ -1.75
SHC1P29353 AC006326.1-201ENST00000445465 787 ntBASIC4.1□□□□□ -1.75
SHC1P29353 AL591363.1-201ENST00000450091 483 ntBASIC4.1□□□□□ -1.75
SHC1P29353 NDUFA12P1-201ENST00000455914 406 ntBASIC4.1□□□□□ -1.75
SHC1P29353 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.1□□□□□ -1.75
SHC1P29353 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.1□□□□□ -1.75
SHC1P29353 AC096741.1-201ENST00000472250 846 ntBASIC4.1□□□□□ -1.75
SHC1P29353 OR9N1P-202ENST00000494289 481 ntBASIC4.1□□□□□ -1.75
SHC1P29353 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
SHC1P29353 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.1□□□□□ -1.75
SHC1P29353 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.1□□□□□ -1.75
SHC1P29353 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.1□□□□□ -1.75
SHC1P29353 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.1□□□□□ -1.75
SHC1P29353 RNA5SP228-201ENST00000516232 133 ntBASIC4.1□□□□□ -1.75
SHC1P29353 Y_RNA.717-201ENST00000517106 92 ntBASIC4.1□□□□□ -1.75
SHC1P29353 HMGB1P46-201ENST00000520062 610 ntBASIC4.1□□□□□ -1.75
SHC1P29353 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.1□□□□□ -1.75
SHC1P29353 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.1□□□□□ -1.75
SHC1P29353 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SHC1P29353 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.1□□□□□ -1.75
SHC1P29353 MTND6P33-201ENST00000571794 183 ntBASIC4.1□□□□□ -1.75
SHC1P29353 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.1□□□□□ -1.75
SHC1P29353 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.1□□□□□ -1.75
SHC1P29353 AC234771.5-201ENST00000600161 514 ntBASIC4.1□□□□□ -1.75
SHC1P29353 AC068790.4-201ENST00000602474 263 ntBASIC4.1□□□□□ -1.75
SHC1P29353 AC012213.4-201ENST00000606457 354 ntBASIC4.1□□□□□ -1.75
SHC1P29353 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.1□□□□□ -1.75
SHC1P29353 AC140725.3-201ENST00000616193 880 ntBASIC4.1□□□□□ -1.75
SHC1P29353 AL109659.3-201ENST00000624985 950 ntBASIC4.1□□□□□ -1.75
SHC1P29353 AL049536.1-201ENST00000625043 744 ntBASIC4.1□□□□□ -1.75
SHC1P29353 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SHC1P29353 OR2L1P-202ENST00000641567 1023 ntBASIC4.1□□□□□ -1.75
SHC1P29353 MTND4P26-201ENST00000415971 1359 ntBASIC4.1□□□□□ -1.75
SHC1P29353 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.1□□□□□ -1.75
SHC1P29353 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHC1P29353 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHC1P29353 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHC1P29353 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
SHC1P29353 KPNA2P2-201ENST00000419546 1489 ntBASIC4.1□□□□□ -1.75
SHC1P29353 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHC1P29353 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHC1P29353 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SHC1P29353 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.09□□□□□ -1.75
SHC1P29353 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHC1P29353 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHC1P29353 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SHC1P29353 RN7SKP115-201ENST00000363177 317 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AL136131.1-201ENST00000406079 803 ntBASIC4.09□□□□□ -1.75
SHC1P29353 Z86062.1-201ENST00000406773 777 ntBASIC4.09□□□□□ -1.75
SHC1P29353 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHC1P29353 RNU4-27P-201ENST00000410889 139 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHC1P29353 RPA2P2-201ENST00000419698 796 ntBASIC4.09□□□□□ -1.75
SHC1P29353 OR2X1P-201ENST00000421144 687 ntBASIC4.09□□□□□ -1.75
SHC1P29353 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.09□□□□□ -1.75
SHC1P29353 RPL7AP25-201ENST00000423357 805 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms