Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC107934.1-201ENST00000522215 217 ntBASIC6.94□□□□□ -1.3
VARSP26640 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.94□□□□□ -1.3
VARSP26640 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.94□□□□□ -1.3
VARSP26640 AP001804.3-201ENST00000525146 880 ntBASIC6.94□□□□□ -1.3
VARSP26640 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.94□□□□□ -1.3
VARSP26640 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.94□□□□□ -1.3
VARSP26640 HAUS8P1-201ENST00000549005 542 ntBASIC6.94□□□□□ -1.3
VARSP26640 NDUFA3P4-201ENST00000560814 250 ntBASIC6.94□□□□□ -1.3
VARSP26640 AC090751.1-201ENST00000566966 267 ntBASIC6.94□□□□□ -1.3
VARSP26640 RN7SL667P-201ENST00000582817 298 ntBASIC6.94□□□□□ -1.3
VARSP26640 RPSAP66-201ENST00000592196 606 ntBASIC6.94□□□□□ -1.3
VARSP26640 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.94□□□□□ -1.3
VARSP26640 AC005070.2-201ENST00000604391 260 ntBASIC6.94□□□□□ -1.3
VARSP26640 AL136139.1-201ENST00000605568 222 ntBASIC6.94□□□□□ -1.3
VARSP26640 AC007546.1-201ENST00000619452 559 ntBASIC6.94□□□□□ -1.3
VARSP26640 AC005899.6-201ENST00000620729 297 ntBASIC6.94□□□□□ -1.3
VARSP26640 AC007347.2-201ENST00000623044 180 ntBASIC6.94□□□□□ -1.3
VARSP26640 AC211433.3-201ENST00000623770 375 ntBASIC6.94□□□□□ -1.3
VARSP26640 AC138627.2-201ENST00000624202 601 ntBASIC6.94□□□□□ -1.3
VARSP26640 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.94□□□□□ -1.3
VARSP26640 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.94□□□□□ -1.3
VARSP26640 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.94□□□□□ -1.3
VARSP26640 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VARSP26640 AC073365.1-203ENST00000641055 1992 ntBASIC6.94□□□□□ -1.3
VARSP26640 WDR95P-201ENST00000425638 1542 ntBASIC6.94□□□□□ -1.3
VARSP26640 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARSP26640 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.94□□□□□ -1.3
VARSP26640 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.94□□□□□ -1.3
VARSP26640 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARSP26640 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
VARSP26640 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.94□□□□□ -1.3
VARSP26640 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VARSP26640 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARSP26640 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARSP26640 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARSP26640 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 AC093311.1-201ENST00000506586 2021 ntBASIC6.93□□□□□ -1.3
VARSP26640 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.93□□□□□ -1.3
VARSP26640 AC105749.1-201ENST00000631338 2008 ntBASIC6.93□□□□□ -1.3
VARSP26640 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
VARSP26640 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.93□□□□□ -1.3
VARSP26640 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.93□□□□□ -1.3
VARSP26640 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.93□□□□□ -1.3
VARSP26640 RNA5SP429-201ENST00000363688 109 ntBASIC6.93□□□□□ -1.3
VARSP26640 SNORA11.5-201ENST00000408163 128 ntBASIC6.93□□□□□ -1.3
VARSP26640 RNU2-18P-201ENST00000411224 162 ntBASIC6.93□□□□□ -1.3
VARSP26640 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.93□□□□□ -1.3
VARSP26640 PPIAP23-201ENST00000420099 497 ntBASIC6.93□□□□□ -1.3
VARSP26640 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.93□□□□□ -1.3
VARSP26640 AL590609.2-201ENST00000421430 368 ntBASIC6.93□□□□□ -1.3
VARSP26640 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.93□□□□□ -1.3
VARSP26640 AC006548.1-201ENST00000427470 102 ntBASIC6.93□□□□□ -1.3
VARSP26640 RPL23AP4-201ENST00000427757 463 ntBASIC6.93□□□□□ -1.3
VARSP26640 AC073900.1-201ENST00000429766 776 ntBASIC6.93□□□□□ -1.3
VARSP26640 AL138799.3-201ENST00000438968 350 ntBASIC6.93□□□□□ -1.3
VARSP26640 HMGB3P11-201ENST00000440127 604 ntBASIC6.93□□□□□ -1.3
VARSP26640 AL161626.1-201ENST00000441480 490 ntBASIC6.93□□□□□ -1.3
VARSP26640 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.93□□□□□ -1.3
VARSP26640 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.93□□□□□ -1.3
VARSP26640 PSPC1P2-201ENST00000455130 225 ntBASIC6.93□□□□□ -1.3
VARSP26640 AC098583.1-201ENST00000480875 255 ntBASIC6.93□□□□□ -1.3
VARSP26640 TMEM251P1-201ENST00000503717 318 ntBASIC6.93□□□□□ -1.3
VARSP26640 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.93□□□□□ -1.3
VARSP26640 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.93□□□□□ -1.3
VARSP26640 RNA5SP92-201ENST00000516437 110 ntBASIC6.93□□□□□ -1.3
VARSP26640 AC130366.1-201ENST00000526505 1192 ntBASIC6.93□□□□□ -1.3
VARSP26640 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.93□□□□□ -1.3
VARSP26640 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC6.93□□□□□ -1.3
VARSP26640 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.93□□□□□ -1.3
VARSP26640 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.93□□□□□ -1.3
VARSP26640 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.93□□□□□ -1.3
VARSP26640 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC6.93□□□□□ -1.3
VARSP26640 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.93□□□□□ -1.3
VARSP26640 MIR3135A-201ENST00000578460 77 ntBASIC6.93□□□□□ -1.3
VARSP26640 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.93□□□□□ -1.3
VARSP26640 AC013244.1-201ENST00000604279 193 ntBASIC6.93□□□□□ -1.3
VARSP26640 AC012510.1-201ENST00000607946 759 ntBASIC6.93□□□□□ -1.3
VARSP26640 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 AC078909.2-201ENST00000620584 398 ntBASIC6.93□□□□□ -1.3
VARSP26640 CR381572.1-201ENST00000625098 102 ntBASIC6.93□□□□□ -1.3
VARSP26640 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.93□□□□□ -1.3
VARSP26640 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.93□□□□□ -1.3
VARSP26640 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VARSP26640 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.92□□□□□ -1.3
VARSP26640 MAPK10-261ENST00000641050 3109 ntBASIC6.92□□□□□ -1.3
VARSP26640 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.92□□□□□ -1.3
VARSP26640 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms