Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SCARNA22-201ENST00000503991 125 ntBASIC4.6□□□□□ -1.67
CDH3P22223 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.6□□□□□ -1.67
CDH3P22223 AC108471.1-201ENST00000513977 287 ntBASIC4.6□□□□□ -1.67
CDH3P22223 RNU2-30P-201ENST00000516209 141 ntBASIC4.6□□□□□ -1.67
CDH3P22223 RPL23AP53-201ENST00000521854 457 ntBASIC4.6□□□□□ -1.67
CDH3P22223 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH3P22223 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH3P22223 AP006289.1-201ENST00000538089 277 ntBASIC4.6□□□□□ -1.67
CDH3P22223 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.6□□□□□ -1.67
CDH3P22223 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH3P22223 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH3P22223 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH3P22223 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.6□□□□□ -1.67
CDH3P22223 AL139022.2-201ENST00000606934 443 ntBASIC4.6□□□□□ -1.67
CDH3P22223 AC018645.2-201ENST00000609151 472 ntBASIC4.6□□□□□ -1.67
CDH3P22223 AL391834.1-201ENST00000609609 560 ntBASIC4.6□□□□□ -1.67
CDH3P22223 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH3P22223 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH3P22223 AL049777.1-201ENST00000622740 518 ntBASIC4.6□□□□□ -1.67
CDH3P22223 Z98755.1-201ENST00000407015 1384 ntBASIC4.6□□□□□ -1.67
CDH3P22223 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH3P22223 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH3P22223 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH3P22223 AC068254.2-201ENST00000623938 3577 ntBASIC4.6□□□□□ -1.67
CDH3P22223 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH3P22223 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH3P22223 AC018529.3-201ENST00000624212 2254 ntBASIC4.6□□□□□ -1.67
CDH3P22223 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH3P22223 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH3P22223 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH3P22223 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH3P22223 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CDH3P22223 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CDH3P22223 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.59□□□□□ -1.67
CDH3P22223 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH3P22223 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH3P22223 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CDH3P22223 MIR195-201ENST00000385194 87 ntBASIC4.59□□□□□ -1.67
CDH3P22223 HMGB1P10-201ENST00000395823 563 ntBASIC4.59□□□□□ -1.67
CDH3P22223 RN7SKP216-201ENST00000411050 312 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AC119751.6-201ENST00000416712 186 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH3P22223 AC004448.2-201ENST00000422360 586 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH3P22223 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH3P22223 AL138878.2-201ENST00000440581 1241 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH3P22223 CEACAMP9-201ENST00000442990 513 ntBASIC4.59□□□□□ -1.67
CDH3P22223 NDUFS5P3-201ENST00000450668 321 ntBASIC4.59□□□□□ -1.67
CDH3P22223 HMGB3P21-201ENST00000452483 547 ntBASIC4.59□□□□□ -1.67
CDH3P22223 RN7SL354P-201ENST00000469282 294 ntBASIC4.59□□□□□ -1.67
CDH3P22223 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDH3P22223 CYCSP20-201ENST00000473154 315 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH3P22223 PPM1AP1-201ENST00000502740 1135 ntBASIC4.59□□□□□ -1.67
CDH3P22223 NAMPTP2-201ENST00000505629 1115 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH3P22223 MTND5P11-201ENST00000511037 1812 ntBASIC4.59□□□□□ -1.67
CDH3P22223 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AC133963.2-201ENST00000513686 578 ntBASIC4.59□□□□□ -1.67
CDH3P22223 MTCO3P27-201ENST00000514397 196 ntBASIC4.59□□□□□ -1.67
CDH3P22223 RNA5SP497-201ENST00000516081 97 ntBASIC4.59□□□□□ -1.67
CDH3P22223 RNU6-347P-201ENST00000516658 105 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.59□□□□□ -1.67
CDH3P22223 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH3P22223 CIR1P1-201ENST00000524055 1133 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AC005868.1-201ENST00000536421 331 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH3P22223 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDH3P22223 AL049830.4-201ENST00000555149 351 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH3P22223 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.59□□□□□ -1.67
CDH3P22223 AC104229.1-201ENST00000561364 255 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AC010928.1-201ENST00000592477 1447 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH3P22223 AC026741.1-201ENST00000605892 482 ntBASIC4.59□□□□□ -1.67
CDH3P22223 OR7A19P-201ENST00000608051 733 ntBASIC4.59□□□□□ -1.67
CDH3P22223 OR6R2P-201ENST00000609216 300 ntBASIC4.59□□□□□ -1.67
CDH3P22223 MIR6780A-201ENST00000615089 68 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AC022306.3-201ENST00000619930 550 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AL138955.1-201ENST00000622881 1040 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AC067931.1-201ENST00000624190 671 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AL590396.2-201ENST00000636511 1041 ntBASIC4.59□□□□□ -1.67
CDH3P22223 AL672167.1-203ENST00000641299 2975 ntBASIC4.59□□□□□ -1.67
CDH3P22223 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CDH3P22223 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.59□□□□□ -1.68
CDH3P22223 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.68
CDH3P22223 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CDH3P22223 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH3P22223 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH3P22223 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH3P22223 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH3P22223 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH3P22223 DDX18P5-201ENST00000534547 1306 ntBASIC4.58□□□□□ -1.68
CDH3P22223 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH3P22223 RNU1-108P-201ENST00000362556 161 ntBASIC4.58□□□□□ -1.68
CDH3P22223 RNU6-398P-201ENST00000384143 109 ntBASIC4.58□□□□□ -1.68
CDH3P22223 RNU6-532P-201ENST00000384318 107 ntBASIC4.58□□□□□ -1.68
CDH3P22223 RPS4XP9-201ENST00000405151 780 ntBASIC4.58□□□□□ -1.68
CDH3P22223 RN7SKP106-201ENST00000410832 272 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms