Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.05□□□□□ -1.76
NCK1P16333 AP001781.1-201ENST00000530977 207 ntBASIC4.05□□□□□ -1.76
NCK1P16333 AP002812.4-201ENST00000532139 286 ntBASIC4.05□□□□□ -1.76
NCK1P16333 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.05□□□□□ -1.76
NCK1P16333 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.05□□□□□ -1.76
NCK1P16333 AC015802.5-201ENST00000607478 399 ntBASIC4.05□□□□□ -1.76
NCK1P16333 AL096803.3-201ENST00000609032 532 ntBASIC4.05□□□□□ -1.76
NCK1P16333 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.05□□□□□ -1.76
NCK1P16333 AP004607.9-201ENST00000618202 316 ntBASIC4.05□□□□□ -1.76
NCK1P16333 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NCK1P16333 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NCK1P16333 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
NCK1P16333 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.05□□□□□ -1.76
NCK1P16333 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NCK1P16333 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
NCK1P16333 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NCK1P16333 A2MP1-204ENST00000566278 4130 ntBASIC4.05□□□□□ -1.76
NCK1P16333 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
NCK1P16333 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
NCK1P16333 CR788268.1-201ENST00000603931 1809 ntBASIC4.05□□□□□ -1.76
NCK1P16333 MAPK10-263ENST00000641052 4307 ntBASIC4.04□□□□□ -1.76
NCK1P16333 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NCK1P16333 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NCK1P16333 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NCK1P16333 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NCK1P16333 RNA5SP507-201ENST00000363603 121 ntBASIC4.04□□□□□ -1.76
NCK1P16333 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.04□□□□□ -1.76
NCK1P16333 AL590290.1-201ENST00000405336 380 ntBASIC4.04□□□□□ -1.76
NCK1P16333 RBMY1KP-201ENST00000423480 476 ntBASIC4.04□□□□□ -1.76
NCK1P16333 RPL30P3-201ENST00000424262 333 ntBASIC4.04□□□□□ -1.76
NCK1P16333 AL138785.1-201ENST00000425821 331 ntBASIC4.04□□□□□ -1.76
NCK1P16333 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NCK1P16333 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.04□□□□□ -1.76
NCK1P16333 AC114495.1-201ENST00000441274 436 ntBASIC4.04□□□□□ -1.76
NCK1P16333 CEACAMP7-201ENST00000444105 496 ntBASIC4.04□□□□□ -1.76
NCK1P16333 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.04□□□□□ -1.76
NCK1P16333 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.04□□□□□ -1.76
NCK1P16333 MTND2P8-201ENST00000450555 1025 ntBASIC4.04□□□□□ -1.76
NCK1P16333 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.04□□□□□ -1.76
NCK1P16333 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NCK1P16333 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.04□□□□□ -1.76
NCK1P16333 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.04□□□□□ -1.76
NCK1P16333 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.04□□□□□ -1.76
NCK1P16333 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.04□□□□□ -1.76
NCK1P16333 RPL7AP6-201ENST00000477943 801 ntBASIC4.04□□□□□ -1.76
NCK1P16333 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.04□□□□□ -1.76
NCK1P16333 AC104164.2-201ENST00000496953 495 ntBASIC4.04□□□□□ -1.76
NCK1P16333 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.04□□□□□ -1.76
NCK1P16333 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.04□□□□□ -1.76
NCK1P16333 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.04□□□□□ -1.76
NCK1P16333 AC022790.1-201ENST00000522872 204 ntBASIC4.04□□□□□ -1.76
NCK1P16333 AC090819.1-201ENST00000523800 1111 ntBASIC4.04□□□□□ -1.76
NCK1P16333 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.04□□□□□ -1.76
NCK1P16333 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NCK1P16333 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.04□□□□□ -1.76
NCK1P16333 AC090525.3-201ENST00000605601 189 ntBASIC4.04□□□□□ -1.76
NCK1P16333 AC015849.2-201ENST00000605738 409 ntBASIC4.04□□□□□ -1.76
NCK1P16333 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.04□□□□□ -1.76
NCK1P16333 CR589904.2-201ENST00000612533 440 ntBASIC4.04□□□□□ -1.76
NCK1P16333 AC095038.2-201ENST00000621464 1070 ntBASIC4.04□□□□□ -1.76
NCK1P16333 AP006248.2-201ENST00000623309 592 ntBASIC4.04□□□□□ -1.76
NCK1P16333 CR392039.4-201ENST00000624968 501 ntBASIC4.04□□□□□ -1.76
NCK1P16333 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
NCK1P16333 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.04□□□□□ -1.76
NCK1P16333 AC097504.1-201ENST00000515103 2415 ntBASIC4.04□□□□□ -1.76
NCK1P16333 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NCK1P16333 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NCK1P16333 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NCK1P16333 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NCK1P16333 AC018555.1-201ENST00000567548 1980 ntBASIC4.03□□□□□ -1.76
NCK1P16333 AC092162.3-201ENST00000624511 1624 ntBASIC4.03□□□□□ -1.76
NCK1P16333 MTND4P31-201ENST00000425607 1343 ntBASIC4.03□□□□□ -1.76
NCK1P16333 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NCK1P16333 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NCK1P16333 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NCK1P16333 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NCK1P16333 IGKV7-3-201ENST00000357453 298 ntBASIC4.03□□□□□ -1.76
NCK1P16333 RNU1-87P-201ENST00000363727 170 ntBASIC4.03□□□□□ -1.76
NCK1P16333 RNU1-130P-201ENST00000363930 160 ntBASIC4.03□□□□□ -1.76
NCK1P16333 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.03□□□□□ -1.76
NCK1P16333 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
NCK1P16333 RN7SKP106-201ENST00000410832 272 ntBASIC4.03□□□□□ -1.76
NCK1P16333 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.03□□□□□ -1.76
NCK1P16333 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NCK1P16333 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.03□□□□□ -1.76
NCK1P16333 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NCK1P16333 BRWD1P3-201ENST00000428816 390 ntBASIC4.03□□□□□ -1.76
NCK1P16333 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.03□□□□□ -1.76
NCK1P16333 PSMD10P3-201ENST00000437000 448 ntBASIC4.03□□□□□ -1.76
NCK1P16333 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NCK1P16333 HMGB3P22-202ENST00000451823 572 ntBASIC4.03□□□□□ -1.76
NCK1P16333 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.03□□□□□ -1.76
NCK1P16333 RPL12P20-201ENST00000475538 479 ntBASIC4.03□□□□□ -1.76
NCK1P16333 RN7SL177P-201ENST00000476596 299 ntBASIC4.03□□□□□ -1.76
NCK1P16333 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NCK1P16333 RN7SL629P-201ENST00000489622 285 ntBASIC4.03□□□□□ -1.76
NCK1P16333 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.03□□□□□ -1.76
NCK1P16333 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
NCK1P16333 AC093763.2-201ENST00000505334 1223 ntBASIC4.03□□□□□ -1.76
NCK1P16333 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 209.2 ms