Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
THBS1P07996 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
THBS1P07996 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
THBS1P07996 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.36□□□□□ -1.39
THBS1P07996 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
THBS1P07996 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.36□□□□□ -1.39
THBS1P07996 RPL24P4-201ENST00000326586 421 ntBASIC6.36□□□□□ -1.39
THBS1P07996 RPL23AP57-201ENST00000332361 466 ntBASIC6.36□□□□□ -1.39
THBS1P07996 RNU4-1-201ENST00000363925 141 ntBASIC6.36□□□□□ -1.39
THBS1P07996 Y_RNA.373-201ENST00000365600 103 ntBASIC6.36□□□□□ -1.39
THBS1P07996 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
THBS1P07996 RNU6-1062P-201ENST00000383908 107 ntBASIC6.36□□□□□ -1.39
THBS1P07996 RNU6-1026P-201ENST00000384465 108 ntBASIC6.36□□□□□ -1.39
THBS1P07996 MIR548F5-201ENST00000408421 86 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AL713922.1-201ENST00000416477 747 ntBASIC6.36□□□□□ -1.39
THBS1P07996 MCFD2P1-201ENST00000417812 300 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AL359633.1-201ENST00000421403 310 ntBASIC6.36□□□□□ -1.39
THBS1P07996 CHIAP3-201ENST00000423668 1133 ntBASIC6.36□□□□□ -1.39
THBS1P07996 GAPDHP69-201ENST00000425504 1008 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AC009362.1-201ENST00000427253 406 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.36□□□□□ -1.39
THBS1P07996 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.36□□□□□ -1.39
THBS1P07996 RPL34P6-201ENST00000432390 345 ntBASIC6.36□□□□□ -1.39
THBS1P07996 MYL6P3-201ENST00000436904 432 ntBASIC6.36□□□□□ -1.39
THBS1P07996 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC6.36□□□□□ -1.39
THBS1P07996 CRYGGP-201ENST00000443337 145 ntBASIC6.36□□□□□ -1.39
THBS1P07996 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.36□□□□□ -1.39
THBS1P07996 AC073909.1-201ENST00000447112 999 ntBASIC6.36□□□□□ -1.39
THBS1P07996 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AL354714.5-201ENST00000450131 590 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AC104308.1-201ENST00000454621 333 ntBASIC6.36□□□□□ -1.39
THBS1P07996 TREML3P-201ENST00000457327 501 ntBASIC6.36□□□□□ -1.39
THBS1P07996 TUBBP11-201ENST00000472255 252 ntBASIC6.36□□□□□ -1.39
THBS1P07996 RPL7P6-201ENST00000480903 738 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AC104564.1-201ENST00000493028 407 ntBASIC6.36□□□□□ -1.39
THBS1P07996 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.36□□□□□ -1.39
THBS1P07996 RNA5SP92-201ENST00000516437 110 ntBASIC6.36□□□□□ -1.39
THBS1P07996 SCARNA18.2-201ENST00000516882 84 ntBASIC6.36□□□□□ -1.39
THBS1P07996 RN7SKP98-201ENST00000517070 156 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.36□□□□□ -1.39
THBS1P07996 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.36□□□□□ -1.39
THBS1P07996 NRBF2P4-201ENST00000520874 850 ntBASIC6.36□□□□□ -1.39
THBS1P07996 COX6CP8-201ENST00000522620 226 ntBASIC6.36□□□□□ -1.39
THBS1P07996 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.36□□□□□ -1.39
THBS1P07996 HSPE1P3-201ENST00000559254 309 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC6.36□□□□□ -1.39
THBS1P07996 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
THBS1P07996 SNORD39.2-201ENST00000579995 76 ntBASIC6.36□□□□□ -1.39
THBS1P07996 MIR3118-1-201ENST00000581787 76 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AC069061.3-201ENST00000582254 823 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.36□□□□□ -1.39
THBS1P07996 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.36□□□□□ -1.39
THBS1P07996 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.36□□□□□ -1.39
THBS1P07996 SIGLEC31P-201ENST00000594237 551 ntBASIC6.36□□□□□ -1.39
THBS1P07996 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.36□□□□□ -1.39
THBS1P07996 AL157899.1-201ENST00000604110 936 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AL031777.2-201ENST00000611953 196 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AL161931.1-201ENST00000612768 246 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AC245407.2-201ENST00000614199 451 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AC005899.6-201ENST00000620729 297 ntBASIC6.36□□□□□ -1.39
THBS1P07996 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.36□□□□□ -1.39
THBS1P07996 AC091953.2-201ENST00000623979 160 ntBASIC6.36□□□□□ -1.39
THBS1P07996 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.36□□□□□ -1.39
THBS1P07996 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
THBS1P07996 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.36□□□□□ -1.39
THBS1P07996 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
THBS1P07996 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.36□□□□□ -1.39
THBS1P07996 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
THBS1P07996 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
THBS1P07996 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
THBS1P07996 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
THBS1P07996 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.36□□□□□ -1.39
THBS1P07996 AC078880.4-201ENST00000617627 1749 ntBASIC6.36□□□□□ -1.39
THBS1P07996 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.36□□□□□ -1.39
THBS1P07996 AL355377.1-201ENST00000621125 1653 ntBASIC6.36□□□□□ -1.39
THBS1P07996 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.36□□□□□ -1.39
THBS1P07996 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.36□□□□□ -1.39
THBS1P07996 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
THBS1P07996 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.36□□□□□ -1.39
THBS1P07996 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
THBS1P07996 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.35□□□□□ -1.39
THBS1P07996 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.35□□□□□ -1.39
THBS1P07996 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
THBS1P07996 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
THBS1P07996 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.35□□□□□ -1.39
THBS1P07996 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
THBS1P07996 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.35□□□□□ -1.39
THBS1P07996 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.35□□□□□ -1.39
THBS1P07996 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
THBS1P07996 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
THBS1P07996 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
THBS1P07996 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.35□□□□□ -1.39
THBS1P07996 AL049641.1-201ENST00000441055 1948 ntBASIC6.35□□□□□ -1.39
THBS1P07996 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
THBS1P07996 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
THBS1P07996 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
THBS1P07996 AC023886.2-201ENST00000321285 411 ntBASIC6.35□□□□□ -1.39
THBS1P07996 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
THBS1P07996 RNA5SP65-201ENST00000363166 119 ntBASIC6.35□□□□□ -1.39
THBS1P07996 RNU4-48P-201ENST00000365559 182 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms