Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC126323.6-202ENST00000568092 3511 ntBASIC5.23□□□□□ -1.57
COL5A2P05997 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL5A2P05997 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL5A2P05997 PRELID3BP10-201ENST00000431957 584 ntBASIC5.23□□□□□ -1.57
COL5A2P05997 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.23□□□□□ -1.57
COL5A2P05997 FABP3P2-201ENST00000453169 399 ntBASIC5.23□□□□□ -1.57
COL5A2P05997 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.23□□□□□ -1.57
COL5A2P05997 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.23□□□□□ -1.57
COL5A2P05997 ACTR6P1-201ENST00000514311 1104 ntBASIC5.23□□□□□ -1.57
COL5A2P05997 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.23□□□□□ -1.57
COL5A2P05997 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.23□□□□□ -1.57
COL5A2P05997 AL138721.1-201ENST00000616756 179 ntBASIC5.23□□□□□ -1.57
COL5A2P05997 AC023632.6-201ENST00000624338 2177 ntBASIC5.23□□□□□ -1.57
COL5A2P05997 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
COL5A2P05997 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL5A2P05997 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL5A2P05997 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL5A2P05997 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
COL5A2P05997 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL5A2P05997 Z92545.1-201ENST00000411782 234 ntBASIC5.22□□□□□ -1.57
COL5A2P05997 PGBD4P8-201ENST00000412993 562 ntBASIC5.22□□□□□ -1.57
COL5A2P05997 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.22□□□□□ -1.57
COL5A2P05997 Z74696.2-201ENST00000436514 498 ntBASIC5.22□□□□□ -1.57
COL5A2P05997 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.22□□□□□ -1.57
COL5A2P05997 AL031584.1-201ENST00000447169 754 ntBASIC5.22□□□□□ -1.57
COL5A2P05997 SNRPCP3-201ENST00000474888 476 ntBASIC5.22□□□□□ -1.57
COL5A2P05997 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.22□□□□□ -1.57
COL5A2P05997 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.22□□□□□ -1.57
COL5A2P05997 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.22□□□□□ -1.57
COL5A2P05997 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL5A2P05997 NPM1P47-201ENST00000560843 856 ntBASIC5.22□□□□□ -1.57
COL5A2P05997 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
COL5A2P05997 MIR5187-201ENST00000583479 76 ntBASIC5.22□□□□□ -1.57
COL5A2P05997 BNIP3P11-201ENST00000603878 563 ntBASIC5.22□□□□□ -1.57
COL5A2P05997 AC092354.2-201ENST00000607786 514 ntBASIC5.22□□□□□ -1.57
COL5A2P05997 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.22□□□□□ -1.57
COL5A2P05997 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL5A2P05997 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
COL5A2P05997 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.21□□□□□ -1.57
COL5A2P05997 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL5A2P05997 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL5A2P05997 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL5A2P05997 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL5A2P05997 SNORA3.3-201ENST00000408712 125 ntBASIC5.21□□□□□ -1.58
COL5A2P05997 DPPA2P2-201ENST00000418220 897 ntBASIC5.21□□□□□ -1.58
COL5A2P05997 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.21□□□□□ -1.58
COL5A2P05997 AL590609.2-201ENST00000421430 368 ntBASIC5.21□□□□□ -1.58
COL5A2P05997 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.21□□□□□ -1.58
COL5A2P05997 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.21□□□□□ -1.58
COL5A2P05997 AC008155.2-201ENST00000464337 397 ntBASIC5.21□□□□□ -1.58
COL5A2P05997 AC112206.1-201ENST00000468416 477 ntBASIC5.21□□□□□ -1.58
COL5A2P05997 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.21□□□□□ -1.58
COL5A2P05997 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.21□□□□□ -1.58
COL5A2P05997 AC022968.1-201ENST00000567372 442 ntBASIC5.21□□□□□ -1.58
COL5A2P05997 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.21□□□□□ -1.58
COL5A2P05997 AC012417.1-201ENST00000582307 1039 ntBASIC5.21□□□□□ -1.58
COL5A2P05997 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL5A2P05997 MIR3651-201ENST00000630427 90 ntBASIC5.21□□□□□ -1.58
COL5A2P05997 AP002001.2-201ENST00000529025 1469 ntBASIC5.21□□□□□ -1.58
COL5A2P05997 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL5A2P05997 AL513548.1-201ENST00000562904 1724 ntBASIC5.21□□□□□ -1.58
COL5A2P05997 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL5A2P05997 PRO1804-201ENST00000623780 2050 ntBASIC5.21□□□□□ -1.58
COL5A2P05997 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.21□□□□□ -1.58
COL5A2P05997 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
COL5A2P05997 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL5A2P05997 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
COL5A2P05997 RNA5SP51-201ENST00000364750 119 ntBASIC5.2□□□□□ -1.58
COL5A2P05997 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL5A2P05997 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL5A2P05997 AL035423.1-201ENST00000420331 213 ntBASIC5.2□□□□□ -1.58
COL5A2P05997 RFESDP1-201ENST00000422350 461 ntBASIC5.2□□□□□ -1.58
COL5A2P05997 AC115115.1-201ENST00000449927 248 ntBASIC5.2□□□□□ -1.58
COL5A2P05997 AL133244.1-201ENST00000456007 258 ntBASIC5.2□□□□□ -1.58
COL5A2P05997 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.2□□□□□ -1.58
COL5A2P05997 DEFB109A-201ENST00000482450 265 ntBASIC5.2□□□□□ -1.58
COL5A2P05997 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.2□□□□□ -1.58
COL5A2P05997 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.2□□□□□ -1.58
COL5A2P05997 TRAV11-201ENST00000539512 339 ntBASIC5.2□□□□□ -1.58
COL5A2P05997 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL5A2P05997 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.2□□□□□ -1.58
COL5A2P05997 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.2□□□□□ -1.58
COL5A2P05997 AC016839.1-201ENST00000578162 867 ntBASIC5.2□□□□□ -1.58
COL5A2P05997 MIR4298-201ENST00000584380 73 ntBASIC5.2□□□□□ -1.58
COL5A2P05997 AC010503.3-201ENST00000594355 540 ntBASIC5.2□□□□□ -1.58
COL5A2P05997 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.2□□□□□ -1.58
COL5A2P05997 AC026368.1-201ENST00000614934 690 ntBASIC5.2□□□□□ -1.58
COL5A2P05997 MIR7702-201ENST00000621931 59 ntBASIC5.2□□□□□ -1.58
COL5A2P05997 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.2□□□□□ -1.58
COL5A2P05997 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.2□□□□□ -1.58
COL5A2P05997 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
COL5A2P05997 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL5A2P05997 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL5A2P05997 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL5A2P05997 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL5A2P05997 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL5A2P05997 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL5A2P05997 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
COL5A2P05997 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
COL5A2P05997 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms