Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.71□□□□□ -1.66
CHRNA1P02708 AC007342.7-201ENST00000624610 2337 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.71□□□□□ -1.66
CHRNA1P02708 AL607077.1-201ENST00000401718 499 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 HSPD1P16-201ENST00000402302 394 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.71□□□□□ -1.66
CHRNA1P02708 MRPL50P1-201ENST00000431951 384 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 AL356276.2-201ENST00000435919 558 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.71□□□□□ -1.66
CHRNA1P02708 AL035551.1-201ENST00000446931 348 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.71□□□□□ -1.66
CHRNA1P02708 AL354710.1-201ENST00000453641 246 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 RPL7P22-201ENST00000466005 733 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 AC021205.1-201ENST00000468797 348 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 AL592156.1-201ENST00000508758 304 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 MTCYBP19-201ENST00000517463 1124 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 AC105233.3-201ENST00000531125 744 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.71□□□□□ -1.66
CHRNA1P02708 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.71□□□□□ -1.66
CHRNA1P02708 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.71□□□□□ -1.66
CHRNA1P02708 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 HMGB2P1-201ENST00000591146 634 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 IMMP1LP1-201ENST00000605170 488 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 AC097505.1-201ENST00000610199 565 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 AC008785.1-201ENST00000624475 456 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 AC092159.4-201ENST00000624944 550 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 AC006971.1-201ENST00000407916 4486 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 AL356489.2-201ENST00000566968 3528 ntBASIC4.71□□□□□ -1.66
CHRNA1P02708 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CHRNA1P02708 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA1P02708 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA1P02708 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CHRNA1P02708 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA1P02708 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA1P02708 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA1P02708 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CHRNA1P02708 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA1P02708 RNA5SP307-201ENST00000362863 116 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 RPS24P12-201ENST00000402084 394 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 RN7SKP182-201ENST00000410772 298 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 SNORA74C-2-201ENST00000411179 201 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 CEACAMP8-201ENST00000413902 580 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 AC009237.10-201ENST00000414112 510 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 AL590806.1-201ENST00000415818 853 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.7□□□□□ -1.66
CHRNA1P02708 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA1P02708 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA1P02708 RPL12P46-201ENST00000436610 195 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 RPS26P2-201ENST00000440331 348 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 RPL21P89-201ENST00000444021 467 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.7□□□□□ -1.66
CHRNA1P02708 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA1P02708 RPL23AP81-201ENST00000455252 467 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CHRNA1P02708 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.7□□□□□ -1.66
CHRNA1P02708 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.7□□□□□ -1.66
CHRNA1P02708 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA1P02708 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.7□□□□□ -1.66
CHRNA1P02708 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.7□□□□□ -1.66
CHRNA1P02708 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.7□□□□□ -1.66
CHRNA1P02708 AC010201.1-201ENST00000605051 540 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.7□□□□□ -1.66
CHRNA1P02708 AL353600.1-201ENST00000608148 251 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA1P02708 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.7□□□□□ -1.66
CHRNA1P02708 AL356274.1-201ENST00000617064 410 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 AL596275.2-204ENST00000641628 552 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 AL596275.2-206ENST00000641957 626 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA1P02708 AL133268.1-201ENST00000405676 1401 ntBASIC4.7□□□□□ -1.66
CHRNA1P02708 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA1P02708 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CHRNA1P02708 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA1P02708 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.69□□□□□ -1.66
CHRNA1P02708 BX005019.1-201ENST00000561881 1810 ntBASIC4.69□□□□□ -1.66
CHRNA1P02708 AL451142.2-201ENST00000429076 2090 ntBASIC4.69□□□□□ -1.66
CHRNA1P02708 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.69□□□□□ -1.66
CHRNA1P02708 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHRNA1P02708 NEAT1-202ENST00000501122 22743 ntBASIC4.69□□□□□ -1.66
CHRNA1P02708 MAPK10-286ENST00000641208 8747 ntBASIC4.69□□□□□ -1.66
CHRNA1P02708 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHRNA1P02708 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHRNA1P02708 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHRNA1P02708 RNU1-20P-201ENST00000363314 162 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms