Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTDNEP1O95476 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTDNEP1O95476 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTDNEP1O95476 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTDNEP1O95476 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 RNU1-13P-201ENST00000384499 162 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 RPL21P65-201ENST00000406094 466 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 Y_RNA.625-201ENST00000411256 107 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 RPL7AP73-201ENST00000413490 353 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 OR51A6P-201ENST00000418680 1004 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 HIGD1AP4-201ENST00000430194 280 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 Z74696.2-201ENST00000436514 498 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 AL356535.1-201ENST00000440335 398 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 RANP8-201ENST00000444720 713 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 RPL7L1P1-201ENST00000448259 785 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 AC069499.1-201ENST00000489433 509 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 AC108064.1-201ENST00000513791 460 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 AL360157.1-201ENST00000565962 87 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 AC079684.1-201ENST00000621405 437 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.56□□□□□ -1.68
CTDNEP1O95476 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTDNEP1O95476 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CTDNEP1O95476 SNORA70C-201ENST00000384538 135 ntBASIC4.55□□□□□ -1.68
CTDNEP1O95476 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTDNEP1O95476 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.55□□□□□ -1.68
CTDNEP1O95476 AL691449.1-201ENST00000426570 421 ntBASIC4.55□□□□□ -1.68
CTDNEP1O95476 RSL24D1P6-201ENST00000426934 401 ntBASIC4.55□□□□□ -1.68
CTDNEP1O95476 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.55□□□□□ -1.68
CTDNEP1O95476 ATP5HP2-201ENST00000433885 485 ntBASIC4.55□□□□□ -1.68
CTDNEP1O95476 AC096638.2-201ENST00000434965 711 ntBASIC4.55□□□□□ -1.68
CTDNEP1O95476 TMX2P1-201ENST00000436507 708 ntBASIC4.55□□□□□ -1.68
CTDNEP1O95476 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.55□□□□□ -1.68
CTDNEP1O95476 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.55□□□□□ -1.68
CTDNEP1O95476 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.55□□□□□ -1.68
CTDNEP1O95476 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.55□□□□□ -1.68
CTDNEP1O95476 RPS7P7-201ENST00000463499 571 ntBASIC4.55□□□□□ -1.68
CTDNEP1O95476 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.55□□□□□ -1.68
CTDNEP1O95476 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.55□□□□□ -1.68
CTDNEP1O95476 AC022882.1-201ENST00000532142 501 ntBASIC4.55□□□□□ -1.68
CTDNEP1O95476 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.55□□□□□ -1.68
CTDNEP1O95476 AC090877.1-201ENST00000561418 344 ntBASIC4.55□□□□□ -1.68
CTDNEP1O95476 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.55□□□□□ -1.68
CTDNEP1O95476 AL137246.1-201ENST00000607072 977 ntBASIC4.55□□□□□ -1.68
CTDNEP1O95476 RNU4-89P-201ENST00000607443 133 ntBASIC4.55□□□□□ -1.68
CTDNEP1O95476 AP003392.5-201ENST00000607857 415 ntBASIC4.55□□□□□ -1.68
CTDNEP1O95476 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.55□□□□□ -1.68
CTDNEP1O95476 BX323046.1-201ENST00000610145 535 ntBASIC4.55□□□□□ -1.68
CTDNEP1O95476 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.55□□□□□ -1.68
CTDNEP1O95476 RNA5SP196-201ENST00000625967 102 ntBASIC4.55□□□□□ -1.68
CTDNEP1O95476 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
CTDNEP1O95476 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTDNEP1O95476 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.55□□□□□ -1.68
CTDNEP1O95476 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 THAP12P8-201ENST00000447914 2115 ntBASIC4.54□□□□□ -1.68
CTDNEP1O95476 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTDNEP1O95476 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 YWHAQP9-201ENST00000445891 512 ntBASIC4.54□□□□□ -1.68
CTDNEP1O95476 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 NDUFA5P9-201ENST00000472609 340 ntBASIC4.54□□□□□ -1.68
CTDNEP1O95476 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 FTH1P21-201ENST00000512179 511 ntBASIC4.54□□□□□ -1.68
CTDNEP1O95476 RFPL4AP3-201ENST00000515267 345 ntBASIC4.54□□□□□ -1.68
CTDNEP1O95476 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 AL591424.2-201ENST00000617023 128 ntBASIC4.54□□□□□ -1.68
CTDNEP1O95476 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTDNEP1O95476 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTDNEP1O95476 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CTDNEP1O95476 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTDNEP1O95476 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms