Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.58□□□□□ -1.84
UPK1BO75841 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.58□□□□□ -1.84
UPK1BO75841 VN1R79P-201ENST00000593540 513 ntBASIC3.58□□□□□ -1.84
UPK1BO75841 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.58□□□□□ -1.84
UPK1BO75841 AC027243.2-201ENST00000602530 724 ntBASIC3.58□□□□□ -1.84
UPK1BO75841 AC100767.2-201ENST00000604840 693 ntBASIC3.58□□□□□ -1.84
UPK1BO75841 AL591926.1-201ENST00000620542 217 ntBASIC3.58□□□□□ -1.84
UPK1BO75841 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.58□□□□□ -1.84
UPK1BO75841 AC073592.6-201ENST00000624271 415 ntBASIC3.58□□□□□ -1.84
UPK1BO75841 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.58□□□□□ -1.84
UPK1BO75841 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UPK1BO75841 AL359715.4-201ENST00000606629 1436 ntBASIC3.58□□□□□ -1.84
UPK1BO75841 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.58□□□□□ -1.84
UPK1BO75841 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.58□□□□□ -1.84
UPK1BO75841 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UPK1BO75841 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
UPK1BO75841 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
UPK1BO75841 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
UPK1BO75841 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
UPK1BO75841 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
UPK1BO75841 RNA5SP284-201ENST00000384547 118 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
UPK1BO75841 RPL31P52-201ENST00000407532 367 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1BO75841 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.57□□□□□ -1.84
UPK1BO75841 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1BO75841 AC073069.1-201ENST00000428657 441 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.57□□□□□ -1.84
UPK1BO75841 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.57□□□□□ -1.84
UPK1BO75841 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.57□□□□□ -1.84
UPK1BO75841 YWHAZP2-201ENST00000440317 728 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.57□□□□□ -1.84
UPK1BO75841 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.57□□□□□ -1.84
UPK1BO75841 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1BO75841 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1BO75841 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.57□□□□□ -1.84
UPK1BO75841 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
UPK1BO75841 HMGB3P8-201ENST00000449709 577 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 YWHAEP1-201ENST00000453697 763 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.57□□□□□ -1.84
UPK1BO75841 RPS18P6-201ENST00000476880 458 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1BO75841 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1BO75841 AC006499.3-201ENST00000506077 748 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1BO75841 AC026784.1-201ENST00000507986 352 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1BO75841 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.57□□□□□ -1.84
UPK1BO75841 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1BO75841 SNORD46.2-201ENST00000516021 102 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 SNORA70.14-201ENST00000516205 110 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 RN7SKP83-201ENST00000516512 178 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 AC104997.1-201ENST00000519761 717 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
UPK1BO75841 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.57□□□□□ -1.84
UPK1BO75841 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.57□□□□□ -1.84
UPK1BO75841 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1BO75841 AC022404.1-201ENST00000555320 273 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.57□□□□□ -1.84
UPK1BO75841 MIR4716-201ENST00000579628 84 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 AC079587.1-201ENST00000603846 277 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 AL133338.2-201ENST00000604292 736 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 AL365503.1-201ENST00000605247 905 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 BRDTP1-201ENST00000605735 677 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1BO75841 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
UPK1BO75841 AL096712.1-201ENST00000614561 159 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 AC139769.3-201ENST00000618383 175 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1BO75841 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.57□□□□□ -1.84
UPK1BO75841 AC008013.2-202ENST00000637965 364 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
UPK1BO75841 CASC19-264ENST00000641912 1184 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 CEP170P1-201ENST00000502249 4587 ntBASIC3.57□□□□□ -1.84
UPK1BO75841 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.56□□□□□ -1.84
UPK1BO75841 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1BO75841 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1BO75841 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1BO75841 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.56□□□□□ -1.84
UPK1BO75841 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1BO75841 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
UPK1BO75841 DHFRP5-201ENST00000406944 564 ntBASIC3.56□□□□□ -1.84
UPK1BO75841 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC3.56□□□□□ -1.84
UPK1BO75841 RPL35AP24-201ENST00000413846 330 ntBASIC3.56□□□□□ -1.84
UPK1BO75841 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.56□□□□□ -1.84
UPK1BO75841 RWDD4P2-201ENST00000426392 563 ntBASIC3.56□□□□□ -1.84
UPK1BO75841 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.56□□□□□ -1.84
UPK1BO75841 AC016831.4-201ENST00000438302 307 ntBASIC3.56□□□□□ -1.84
UPK1BO75841 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.56□□□□□ -1.84
UPK1BO75841 XKRYP6-201ENST00000440468 1116 ntBASIC3.56□□□□□ -1.84
UPK1BO75841 AC245047.2-201ENST00000441060 530 ntBASIC3.56□□□□□ -1.84
UPK1BO75841 AL606490.8-201ENST00000441624 319 ntBASIC3.56□□□□□ -1.84
UPK1BO75841 XKRYP3-201ENST00000442113 1116 ntBASIC3.56□□□□□ -1.84
UPK1BO75841 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.56□□□□□ -1.84
UPK1BO75841 AC112498.1-201ENST00000444401 332 ntBASIC3.56□□□□□ -1.84
UPK1BO75841 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.56□□□□□ -1.84
UPK1BO75841 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.56□□□□□ -1.84
UPK1BO75841 HMGN1P36-201ENST00000446623 298 ntBASIC3.56□□□□□ -1.84
UPK1BO75841 RPL36AP13-201ENST00000457490 317 ntBASIC3.56□□□□□ -1.84
UPK1BO75841 RWDD4P1-201ENST00000488019 565 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms