Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 SS18L2P2-201ENST00000583960 235 ntBASIC4.62□□□□□ -1.67
MSH4O15457 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.62□□□□□ -1.67
MSH4O15457 AC090948.2-201ENST00000607363 564 ntBASIC4.62□□□□□ -1.67
MSH4O15457 AC090246.1-201ENST00000616499 426 ntBASIC4.62□□□□□ -1.67
MSH4O15457 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.62□□□□□ -1.67
MSH4O15457 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MSH4O15457 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
MSH4O15457 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MSH4O15457 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.61□□□□□ -1.67
MSH4O15457 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.61□□□□□ -1.67
MSH4O15457 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MSH4O15457 AC087565.3-202ENST00000642085 1603 ntBASIC4.61□□□□□ -1.67
MSH4O15457 TTC39DP-201ENST00000416781 1688 ntBASIC4.61□□□□□ -1.67
MSH4O15457 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MSH4O15457 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MSH4O15457 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MSH4O15457 RNU4-44P-201ENST00000363050 141 ntBASIC4.61□□□□□ -1.67
MSH4O15457 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
MSH4O15457 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
MSH4O15457 RPL21P65-201ENST00000406094 466 ntBASIC4.61□□□□□ -1.67
MSH4O15457 AL356967.1-201ENST00000406305 431 ntBASIC4.61□□□□□ -1.67
MSH4O15457 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.61□□□□□ -1.67
MSH4O15457 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.61□□□□□ -1.67
MSH4O15457 AL117339.2-201ENST00000430475 180 ntBASIC4.61□□□□□ -1.67
MSH4O15457 AC006326.1-201ENST00000445465 787 ntBASIC4.61□□□□□ -1.67
MSH4O15457 HSFY6P-201ENST00000445573 403 ntBASIC4.61□□□□□ -1.67
MSH4O15457 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.61□□□□□ -1.67
MSH4O15457 RPL31P20-201ENST00000449593 360 ntBASIC4.61□□□□□ -1.67
MSH4O15457 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.61□□□□□ -1.67
MSH4O15457 RPL38P1-201ENST00000460914 211 ntBASIC4.61□□□□□ -1.67
MSH4O15457 AL132838.2-201ENST00000492041 314 ntBASIC4.61□□□□□ -1.67
MSH4O15457 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MSH4O15457 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.61□□□□□ -1.67
MSH4O15457 AC022784.5-201ENST00000522241 437 ntBASIC4.61□□□□□ -1.67
MSH4O15457 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.61□□□□□ -1.67
MSH4O15457 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.61□□□□□ -1.67
MSH4O15457 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.61□□□□□ -1.67
MSH4O15457 AC007599.1-201ENST00000568688 1174 ntBASIC4.61□□□□□ -1.67
MSH4O15457 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.61□□□□□ -1.67
MSH4O15457 AL121890.2-201ENST00000617644 465 ntBASIC4.61□□□□□ -1.67
MSH4O15457 AC006840.1-201ENST00000623069 542 ntBASIC4.61□□□□□ -1.67
MSH4O15457 AP005264.7-201ENST00000625003 745 ntBASIC4.61□□□□□ -1.67
MSH4O15457 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.61□□□□□ -1.67
MSH4O15457 AC055839.1-201ENST00000634467 498 ntBASIC4.61□□□□□ -1.67
MSH4O15457 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.61□□□□□ -1.67
MSH4O15457 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.61□□□□□ -1.67
MSH4O15457 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.61□□□□□ -1.67
MSH4O15457 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MSH4O15457 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
MSH4O15457 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
MSH4O15457 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MSH4O15457 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
MSH4O15457 RNU6-618P-201ENST00000363518 112 ntBASIC4.6□□□□□ -1.67
MSH4O15457 RNA5SP513-201ENST00000364648 118 ntBASIC4.6□□□□□ -1.67
MSH4O15457 RNA5SP283-201ENST00000365604 119 ntBASIC4.6□□□□□ -1.67
MSH4O15457 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.6□□□□□ -1.67
MSH4O15457 AP000357.1-201ENST00000409926 1165 ntBASIC4.6□□□□□ -1.67
MSH4O15457 RNA5SP146-201ENST00000410743 123 ntBASIC4.6□□□□□ -1.67
MSH4O15457 GSTM3P2-201ENST00000412746 530 ntBASIC4.6□□□□□ -1.67
MSH4O15457 PGBD4P8-201ENST00000412993 562 ntBASIC4.6□□□□□ -1.67
MSH4O15457 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.6□□□□□ -1.67
MSH4O15457 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.6□□□□□ -1.67
MSH4O15457 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.6□□□□□ -1.67
MSH4O15457 RN7SL585P-201ENST00000470538 280 ntBASIC4.6□□□□□ -1.67
MSH4O15457 AC022795.1-201ENST00000473808 480 ntBASIC4.6□□□□□ -1.67
MSH4O15457 OR9N1P-201ENST00000491296 333 ntBASIC4.6□□□□□ -1.67
MSH4O15457 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.6□□□□□ -1.67
MSH4O15457 ARL4AP1-201ENST00000503220 705 ntBASIC4.6□□□□□ -1.67
MSH4O15457 STMN1P2-201ENST00000508435 439 ntBASIC4.6□□□□□ -1.67
MSH4O15457 AC117525.1-201ENST00000515228 503 ntBASIC4.6□□□□□ -1.67
MSH4O15457 AC134698.5-201ENST00000519444 336 ntBASIC4.6□□□□□ -1.67
MSH4O15457 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.6□□□□□ -1.67
MSH4O15457 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.6□□□□□ -1.67
MSH4O15457 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.6□□□□□ -1.67
MSH4O15457 AC012417.1-201ENST00000582307 1039 ntBASIC4.6□□□□□ -1.67
MSH4O15457 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MSH4O15457 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.6□□□□□ -1.67
MSH4O15457 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.6□□□□□ -1.67
MSH4O15457 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.6□□□□□ -1.67
MSH4O15457 AL669942.2-201ENST00000620352 697 ntBASIC4.6□□□□□ -1.67
MSH4O15457 AC008785.1-201ENST00000624475 456 ntBASIC4.6□□□□□ -1.67
MSH4O15457 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
MSH4O15457 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MSH4O15457 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
MSH4O15457 MTCO1P8-201ENST00000416914 1523 ntBASIC4.6□□□□□ -1.67
MSH4O15457 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MSH4O15457 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
MSH4O15457 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
MSH4O15457 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.59□□□□□ -1.67
MSH4O15457 RNU6-670P-201ENST00000364312 104 ntBASIC4.59□□□□□ -1.67
MSH4O15457 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
MSH4O15457 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
MSH4O15457 AC104297.1-201ENST00000393779 870 ntBASIC4.59□□□□□ -1.67
MSH4O15457 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH4O15457 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH4O15457 AC013470.3-201ENST00000420252 1194 ntBASIC4.59□□□□□ -1.67
MSH4O15457 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH4O15457 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH4O15457 TBCAP1-201ENST00000436520 327 ntBASIC4.59□□□□□ -1.67
MSH4O15457 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms