Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.04□□□□□ -1.28
CUX2O14529 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.04□□□□□ -1.28
CUX2O14529 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC7.04□□□□□ -1.28
CUX2O14529 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CUX2O14529 AC118273.1-201ENST00000525324 3006 ntBASIC7.04□□□□□ -1.28
CUX2O14529 GVINP1-202ENST00000531871 7271 ntBASIC7.04□□□□□ -1.28
CUX2O14529 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
CUX2O14529 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC7.04□□□□□ -1.28
CUX2O14529 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC7.04□□□□□ -1.28
CUX2O14529 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC7.04□□□□□ -1.28
CUX2O14529 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CUX2O14529 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CUX2O14529 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CUX2O14529 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CUX2O14529 AC234772.1-201ENST00000377927 937 ntBASIC7.04□□□□□ -1.28
CUX2O14529 UBA52P6-201ENST00000399822 382 ntBASIC7.04□□□□□ -1.28
CUX2O14529 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC7.04□□□□□ -1.28
CUX2O14529 DCLRE1CP1-201ENST00000454630 470 ntBASIC7.04□□□□□ -1.28
CUX2O14529 AL591473.1-201ENST00000464297 313 ntBASIC7.04□□□□□ -1.28
CUX2O14529 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC7.04□□□□□ -1.28
CUX2O14529 USP9YP2-201ENST00000504503 1000 ntBASIC7.04□□□□□ -1.28
CUX2O14529 USP9YP1-201ENST00000513521 1002 ntBASIC7.04□□□□□ -1.28
CUX2O14529 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC7.04□□□□□ -1.28
CUX2O14529 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC7.04□□□□□ -1.28
CUX2O14529 AC068722.2-201ENST00000618734 544 ntBASIC7.04□□□□□ -1.28
CUX2O14529 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC7.04□□□□□ -1.28
CUX2O14529 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC7.04□□□□□ -1.28
CUX2O14529 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CUX2O14529 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
CUX2O14529 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CUX2O14529 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC7.03□□□□□ -1.28
CUX2O14529 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CUX2O14529 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CUX2O14529 RN7SKP167-201ENST00000411047 285 ntBASIC7.03□□□□□ -1.28
CUX2O14529 AC097713.2-201ENST00000430199 356 ntBASIC7.03□□□□□ -1.28
CUX2O14529 HSPE1P27-201ENST00000430808 296 ntBASIC7.03□□□□□ -1.28
CUX2O14529 AL591503.2-201ENST00000442314 1005 ntBASIC7.03□□□□□ -1.28
CUX2O14529 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC7.03□□□□□ -1.28
CUX2O14529 AC108751.2-201ENST00000469993 231 ntBASIC7.03□□□□□ -1.28
CUX2O14529 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC7.03□□□□□ -1.28
CUX2O14529 AC090312.1-201ENST00000580637 348 ntBASIC7.03□□□□□ -1.28
CUX2O14529 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC7.03□□□□□ -1.28
CUX2O14529 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC7.03□□□□□ -1.28
CUX2O14529 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC7.03□□□□□ -1.28
CUX2O14529 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CUX2O14529 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC7.02□□□□□ -1.29
CUX2O14529 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
CUX2O14529 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC7.02□□□□□ -1.29
CUX2O14529 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CUX2O14529 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CUX2O14529 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CUX2O14529 VN1R32P-201ENST00000452234 905 ntBASIC7.02□□□□□ -1.29
CUX2O14529 AL133162.1-201ENST00000463228 453 ntBASIC7.02□□□□□ -1.29
CUX2O14529 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC7.02□□□□□ -1.29
CUX2O14529 RNU4ATAC17P-201ENST00000517272 120 ntBASIC7.02□□□□□ -1.29
CUX2O14529 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC7.02□□□□□ -1.29
CUX2O14529 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC7.02□□□□□ -1.29
CUX2O14529 AL352979.3-201ENST00000553515 247 ntBASIC7.02□□□□□ -1.29
CUX2O14529 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC7.02□□□□□ -1.29
CUX2O14529 MIR3936-201ENST00000584304 110 ntBASIC7.02□□□□□ -1.29
CUX2O14529 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC7.02□□□□□ -1.29
CUX2O14529 AC013412.1-201ENST00000610687 192 ntBASIC7.02□□□□□ -1.29
CUX2O14529 MIR8058-201ENST00000615737 89 ntBASIC7.02□□□□□ -1.29
CUX2O14529 AC022106.2-201ENST00000620114 757 ntBASIC7.02□□□□□ -1.29
CUX2O14529 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC7.02□□□□□ -1.29
CUX2O14529 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CUX2O14529 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CUX2O14529 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CUX2O14529 MTCO1P24-201ENST00000515438 1558 ntBASIC7.01□□□□□ -1.29
CUX2O14529 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.01□□□□□ -1.29
CUX2O14529 AL450992.3-201ENST00000413192 568 ntBASIC7.01□□□□□ -1.29
CUX2O14529 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC7.01□□□□□ -1.29
CUX2O14529 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC7.01□□□□□ -1.29
CUX2O14529 RPL7P22-201ENST00000466005 733 ntBASIC7.01□□□□□ -1.29
CUX2O14529 AC005726.1-201ENST00000494679 427 ntBASIC7.01□□□□□ -1.29
CUX2O14529 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC7.01□□□□□ -1.29
CUX2O14529 RN7SKP18-201ENST00000516005 275 ntBASIC7.01□□□□□ -1.29
CUX2O14529 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC7.01□□□□□ -1.29
CUX2O14529 MIR4472-2-201ENST00000582069 67 ntBASIC7.01□□□□□ -1.29
CUX2O14529 MIR4325-201ENST00000583049 90 ntBASIC7.01□□□□□ -1.29
CUX2O14529 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CUX2O14529 AL645927.2-201ENST00000618350 349 ntBASIC7.01□□□□□ -1.29
CUX2O14529 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CUX2O14529 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CUX2O14529 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC7□□□□□ -1.29
CUX2O14529 AC010266.2-201ENST00000564741 3255 ntBASIC7□□□□□ -1.29
CUX2O14529 MIR490-201ENST00000384865 128 ntBASIC7□□□□□ -1.29
CUX2O14529 TRIM60P17-201ENST00000415181 719 ntBASIC7□□□□□ -1.29
CUX2O14529 OR5BE1P-201ENST00000425977 939 ntBASIC7□□□□□ -1.29
CUX2O14529 FTH1P24-201ENST00000503502 462 ntBASIC7□□□□□ -1.29
CUX2O14529 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC7□□□□□ -1.29
CUX2O14529 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC7□□□□□ -1.29
CUX2O14529 COX6CP4-201ENST00000605798 228 ntBASIC7□□□□□ -1.29
CUX2O14529 AC091905.2-201ENST00000623143 306 ntBASIC7□□□□□ -1.29
CUX2O14529 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC7□□□□□ -1.29
CUX2O14529 OR5BE1P-202ENST00000641168 1176 ntBASIC7□□□□□ -1.29
CUX2O14529 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
CUX2O14529 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CUX2O14529 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
CUX2O14529 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms