Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 Z86062.1-201ENST00000406773 777 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 TRGV6-201ENST00000417928 299 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 UBTFL3-201ENST00000418934 1024 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 AC104837.2-201ENST00000427236 424 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM1O00151 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.32□□□□□ -1.72
PDLIM1O00151 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM1O00151 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.32□□□□□ -1.72
PDLIM1O00151 OR52J1P-201ENST00000450596 932 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM1O00151 UBTFL6-201ENST00000477929 1024 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 METTL15P1-201ENST00000481421 1045 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM1O00151 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM1O00151 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.32□□□□□ -1.72
PDLIM1O00151 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.32□□□□□ -1.72
PDLIM1O00151 MTND2P31-201ENST00000512602 616 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM1O00151 RNU6-1308P-201ENST00000516817 103 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM1O00151 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.32□□□□□ -1.72
PDLIM1O00151 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.32□□□□□ -1.72
PDLIM1O00151 CKS1BP1-201ENST00000555221 240 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 AC090515.3-201ENST00000560431 315 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 MIR3934-201ENST00000579806 107 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.32□□□□□ -1.72
PDLIM1O00151 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM1O00151 HMGB2P1-201ENST00000591146 634 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.32□□□□□ -1.72
PDLIM1O00151 FAM25E-202ENST00000608562 189 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 AL391261.4-201ENST00000616012 481 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM1O00151 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM1O00151 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM1O00151 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.32□□□□□ -1.72
PDLIM1O00151 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM1O00151 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM1O00151 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM1O00151 RPS4XP5-202ENST00000449995 1334 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 XIAPP3-201ENST00000312918 795 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 RNU6-146P-201ENST00000384602 108 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AC009237.5-201ENST00000414271 501 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 RBMY2KP-201ENST00000418221 992 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM1O00151 MTND4P24-201ENST00000424002 397 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM1O00151 ZNF965P-201ENST00000432501 817 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 XKRY2-201ENST00000442362 1093 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 AC073648.4-201ENST00000442655 781 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AC023512.1-201ENST00000444513 499 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM1O00151 RPL35AP28-201ENST00000459730 331 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 AC092324.1-201ENST00000468671 324 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 MTND6P6-201ENST00000478031 263 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM1O00151 MORF4L1P3-201ENST00000525966 950 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM1O00151 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AC023158.1-201ENST00000561632 1025 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 LINC00557-201ENST00000563184 1279 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AC018552.3-201ENST00000567416 561 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.31□□□□□ -1.72
PDLIM1O00151 MIR4737-201ENST00000583979 81 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 BNIP3P32-201ENST00000600015 554 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 AC242628.1-201ENST00000606810 391 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 BX323046.1-201ENST00000610145 535 ntBASIC4.31□□□□□ -1.72
PDLIM1O00151 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PDLIM1O00151 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM1O00151 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM1O00151 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM1O00151 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PDLIM1O00151 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM1O00151 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM1O00151 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM1O00151 AC066616.2-201ENST00000559334 1481 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 AC114546.3-201ENST00000623582 1734 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM1O00151 FAM3C2-201ENST00000312214 681 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PDLIM1O00151 SNORD51.1-201ENST00000365405 77 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PDLIM1O00151 RNU1-82P-201ENST00000390851 165 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 UBE2V1P15-201ENST00000407776 448 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 SNORA11B-201ENST00000408175 129 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms