Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC006116.5-201ENST00000591936 559 ntBASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL021997.2-201ENST00000615674 271 ntBASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 MIR6891-201ENST00000618788 93 ntBASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC008785.1-201ENST00000624475 456 ntBASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 BMS1P21-201ENST00000634565 365 ntBASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC132825.8-201ENST00000640783 297 ntBASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 NXPH1-205ENST00000602349 1953 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 RN7SKP280-201ENST00000364196 304 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 RN7SKP202-201ENST00000410439 330 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 CASKP1-201ENST00000412870 582 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 MTND2P11-201ENST00000423638 648 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 MRPL50P1-201ENST00000431951 384 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC044797.1-201ENST00000445744 679 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 Z95327.1-201ENST00000446082 482 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 RPL5P32-201ENST00000454085 879 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 OR7L1P-201ENST00000456181 380 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 PSMC1P13-201ENST00000458195 985 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 RPS26P15-201ENST00000488067 348 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC108022.1-201ENST00000493466 478 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 RNA5SP49-201ENST00000516450 115 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 MTCO1P49-201ENST00000523429 802 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 TRAV8-5-201ENST00000537369 341 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC122134.1-201ENST00000565664 1104 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 CYP4A43P-201ENST00000568156 121 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC008759.1-201ENST00000589783 983 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 BNIP3P22-201ENST00000593399 556 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC010201.1-201ENST00000605051 540 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 RNU4-89P-201ENST00000607443 133 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC099676.1-201ENST00000608886 657 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC091905.2-201ENST00000623143 306 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC105074.1-201ENST00000623380 3095 ntBASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TMX2-CTNND1H3BSU7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC007342.9-201ENST00000623877 1385 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 OR10J6P-201ENST00000289731 930 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 RNU6-178P-201ENST00000384631 104 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL161909.1-201ENST00000397390 712 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 RNA5SP306-201ENST00000411087 107 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC013470.3-201ENST00000420252 1194 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL034379.1-201ENST00000423216 253 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 RPL23AP52-201ENST00000439311 478 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 FGF7P3-201ENST00000454645 303 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 RPL23AP65-201ENST00000475608 468 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC025445.1-201ENST00000502728 300 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 VWA8P1-201ENST00000510889 176 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC099522.1-202ENST00000514718 367 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 RNU6-751P-201ENST00000516382 101 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 RNA5SP73-201ENST00000516744 108 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 RN7SKP5-201ENST00000517045 272 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC022784.5-201ENST00000522241 437 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 MTATP6P25-201ENST00000574491 261 ntBASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.16□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms