Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC010476.1-201ENST00000519111 851 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC104229.1-201ENST00000561364 255 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AL133338.2-201ENST00000604292 736 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC013244.3-201ENST00000605614 388 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AP000770.2-201ENST00000623694 100 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC013437.2-201ENST00000639587 677 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.96□□□□□ -1.61
SNX9Q9Y5X1 AC093535.2-201ENST00000624769 2326 ntBASIC4.96□□□□□ -1.61
SNX9Q9Y5X1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AC099336.2-201ENST00000422457 254 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AL160175.1-201ENST00000428124 247 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 NMNAT1P2-201ENST00000435192 860 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AL354710.1-201ENST00000453641 246 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AC099560.2-201ENST00000457554 255 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 snoU109.3-201ENST00000459477 145 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 RPL21P18-201ENST00000469899 480 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 OR52A4P-201ENST00000472867 958 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AC020890.1-201ENST00000491837 504 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AC112518.2-201ENST00000508565 425 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AP001781.1-201ENST00000530977 207 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AC124283.4-201ENST00000581815 456 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 CBX3P2-202ENST00000583365 535 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AC124016.2-201ENST00000610058 665 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 HSPD1P11-201ENST00000508643 1702 ntBASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SNX9Q9Y5X1 AL445437.1-201ENST00000623157 3087 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AL672167.1-205ENST00000641112 3080 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AC015813.6-201ENST00000624409 5808 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AC021146.4-201ENST00000309229 279 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 RNU6-31P-201ENST00000384388 108 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 RNU6-225P-201ENST00000384613 103 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AC093719.1-202ENST00000392735 373 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 RPS3AP23-201ENST00000401762 784 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AL034374.1-201ENST00000406329 351 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 RN7SKP216-201ENST00000411050 312 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AC006065.1-201ENST00000422539 802 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 MTCYBP15-201ENST00000433123 1127 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 MTND1P26-201ENST00000440488 538 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AL353898.1-201ENST00000444055 238 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AC104651.2-201ENST00000447549 528 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 HMGB1P26-201ENST00000452520 628 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 SCARNA10-201ENST00000459255 330 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AC021205.1-201ENST00000468797 348 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 RPS3AP6-201ENST00000484430 795 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AC133963.2-201ENST00000513686 578 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms