Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 Y_RNA.2-201ENST00000362330 96 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 RNU6-1151P-201ENST00000384684 107 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 RNA5SP36-201ENST00000410197 133 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 AL359265.2-201ENST00000434367 631 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 HIGD1AP11-201ENST00000438361 280 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 RPS3AP46-201ENST00000448352 682 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 MTCO3P8-201ENST00000453691 755 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 RNU7-120P-201ENST00000459334 63 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 RPS18P13-201ENST00000461260 454 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 CBX5P1-201ENST00000468470 561 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 RPL23P10-201ENST00000468780 412 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 AC009153.1-201ENST00000485799 496 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 OR52K3P-201ENST00000531655 943 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 AC136944.5-201ENST00000573021 151 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 RN7SL178P-201ENST00000582930 304 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 MIR5188-201ENST00000583467 113 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 AC244100.1-202ENST00000621554 382 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 ERVFRD-3-201ENST00000578561 1617 ntBASIC7.38□□□□□ -1.23
VPS9D1Q9Y2B5 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 DLD-204ENST00000437604 1859 ntTSL 2 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AL359396.1-201ENST00000623151 2376 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 Y_RNA.170-201ENST00000363746 110 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 RNA5SP394-201ENST00000364216 119 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 SNORA41-201ENST00000384675 132 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 GNAI2P2-201ENST00000417003 916 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 RPSAP59-201ENST00000421048 890 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 RBM22P7-201ENST00000421321 280 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC233981.1-201ENST00000423224 461 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 RPSAP65-201ENST00000429660 595 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 RPS24P8-201ENST00000431490 402 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 CYP2C56P-201ENST00000440076 291 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 RPL21P133-201ENST00000443666 476 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC011225.1-201ENST00000457751 369 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC022730.2-201ENST00000465359 452 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC040975.1-201ENST00000472104 316 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC015820.1-201ENST00000473882 321 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC083829.1-201ENST00000503756 657 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 SSX8-201ENST00000506270 579 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 MIR4258-201ENST00000580920 91 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC011477.5-201ENST00000586571 259 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AL031320.1-201ENST00000604177 357 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC012510.1-201ENST00000607946 759 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 DUSP12P1-201ENST00000612874 516 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms