Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 CFL1P4-201ENST00000451536 498 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 SNX18P26-201ENST00000458433 740 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AC023598.1-201ENST00000472521 361 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AC074386.1-201ENST00000476560 767 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 RN7SL177P-201ENST00000476596 299 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 RN7SL273P-201ENST00000481561 299 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 HMGB3P17-201ENST00000504195 649 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 PSMA2P2-201ENST00000504319 686 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 IGHV1-14-201ENST00000523391 241 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AP003396.4-201ENST00000527574 265 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AC073046.2-201ENST00000604756 527 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AL080274.1-201ENST00000605565 220 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AL157817.1-201ENST00000614264 790 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AL139089.1-201ENST00000620372 975 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 HSPD1P8-201ENST00000400121 1658 ntBASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC8.02□□□□□ -1.13
PDZRN3Q9UPQ7 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 MAPK10-287ENST00000641217 3037 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 MGP-201ENST00000228938 694 ntTSL 3 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 Y_RNA.47-201ENST00000362697 108 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AL049693.1-201ENST00000402760 611 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 RNA5SP80-201ENST00000410475 111 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 NRBF2P2-201ENST00000413087 861 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 CYP4F30P-202ENST00000420048 405 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AC079355.1-201ENST00000421770 223 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 ETF1P3-201ENST00000430422 1160 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AL606490.7-201ENST00000433136 191 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AL050341.1-201ENST00000447743 313 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 OR2A1-AS1-202ENST00000467944 422 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AC098847.1-201ENST00000473094 348 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AP000797.1-201ENST00000478870 387 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 OR4D12P-201ENST00000509361 911 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 SNORD46.2-201ENST00000516021 102 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 PAICSP4-201ENST00000517543 1253 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 BRD9P1-201ENST00000529855 560 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AP003122.4-201ENST00000530980 758 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AP000889.2-201ENST00000532684 490 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 PSMB7P1-201ENST00000556349 514 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 TPRX1P1-201ENST00000557620 319 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 MIR3912-201ENST00000577566 105 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 RPL12P25-202ENST00000598100 674 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AC090948.1-201ENST00000607464 549 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AF001550.2-201ENST00000636643 217 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AC114786.1-201ENST00000512892 1415 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 AL355377.1-201ENST00000621125 1653 ntBASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC8.01□□□□□ -1.13
PDZRN3Q9UPQ7 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 AL354854.1-201ENST00000455940 1363 ntBASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 ASNSP1-204ENST00000641977 1664 ntBASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 SNORA4.1-201ENST00000364263 144 ntBASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 RN7SKP281-201ENST00000410472 352 ntBASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 OR9R1P-201ENST00000412200 877 ntBASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms