Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 TCEA1P2-201ENST00000420496 906 ntBASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 CAB39P1-201ENST00000502277 460 ntBASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 RNU7-143P-201ENST00000516781 65 ntBASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 MTND1P6-201ENST00000523621 946 ntBASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 OR8I1P-201ENST00000529291 931 ntBASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 AC106782.4-201ENST00000568264 210 ntBASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 AC007599.1-201ENST00000568688 1174 ntBASIC5.34□□□□□ -1.56
PHRF1Q9P1Y6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 MIR34B-201ENST00000385076 84 ntBASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 Z92545.1-201ENST00000411782 234 ntBASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 AC012158.1-204ENST00000483430 465 ntBASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 CDH12P2-201ENST00000504393 298 ntBASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 AC026427.2-201ENST00000506228 536 ntBASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 MIR3922-201ENST00000585192 84 ntBASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 AC023509.5-201ENST00000617434 807 ntBASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
PHRF1Q9P1Y6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 AP004289.2-201ENST00000444413 1457 ntBASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 RNA5SP72-201ENST00000364442 117 ntBASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 MIR199A2-201ENST00000385289 110 ntBASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 RN7SKP97-201ENST00000410966 333 ntBASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 GMPSP1-201ENST00000514075 579 ntBASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 AC055839.1-201ENST00000634467 498 ntBASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 TCP1P3-201ENST00000414406 1498 ntBASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHRF1Q9P1Y6 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 Y_RNA.111-201ENST00000363248 100 ntBASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 SNORD3H-201ENST00000384486 214 ntBASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 MIR634-201ENST00000385208 97 ntBASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 AC073335.1-201ENST00000427776 363 ntBASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 RPS17P13-201ENST00000448974 407 ntBASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 AL133162.1-201ENST00000463228 453 ntBASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 SETP14-201ENST00000497538 873 ntBASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 DUX4L52-201ENST00000549363 777 ntBASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 AL451044.1-201ENST00000604867 238 ntBASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 BNIP3P41-202ENST00000616656 861 ntBASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.31□□□□□ -1.56
PHRF1Q9P1Y6 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 MIR195-201ENST00000385194 87 ntBASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 RPL12P18-201ENST00000437175 325 ntBASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 RN7SL293P-201ENST00000481765 281 ntBASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 AC008694.2-201ENST00000517591 306 ntBASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 AL672167.1-203ENST00000641299 2975 ntBASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms