Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 SNORD74.4-201ENST00000364129 80 ntBASIC4.15□□□□□ -1.75
TREX1Q9NSU2 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 RPL23AP46-201ENST00000438548 490 ntBASIC4.15□□□□□ -1.75
TREX1Q9NSU2 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 NDUFS5P3-201ENST00000450668 321 ntBASIC4.15□□□□□ -1.75
TREX1Q9NSU2 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.15□□□□□ -1.75
TREX1Q9NSU2 AC010469.1-201ENST00000463864 576 ntBASIC4.15□□□□□ -1.75
TREX1Q9NSU2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 S100A11P1-201ENST00000477525 312 ntBASIC4.15□□□□□ -1.75
TREX1Q9NSU2 AF213884.1-201ENST00000488102 463 ntBASIC4.15□□□□□ -1.75
TREX1Q9NSU2 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 CDH12P4-201ENST00000517835 295 ntBASIC4.15□□□□□ -1.75
TREX1Q9NSU2 CDH12P3-201ENST00000517935 295 ntBASIC4.15□□□□□ -1.75
TREX1Q9NSU2 CDH12P1-201ENST00000518435 295 ntBASIC4.15□□□□□ -1.75
TREX1Q9NSU2 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 MTND1P6-201ENST00000523621 946 ntBASIC4.15□□□□□ -1.75
TREX1Q9NSU2 OR7E10P-201ENST00000526420 991 ntBASIC4.15□□□□□ -1.75
TREX1Q9NSU2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 AC119501.1-201ENST00000603646 475 ntBASIC4.15□□□□□ -1.75
TREX1Q9NSU2 MIR7151-201ENST00000617477 60 ntBASIC4.15□□□□□ -1.75
TREX1Q9NSU2 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.15□□□□□ -1.75
TREX1Q9NSU2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 MARK2P15-201ENST00000432204 2186 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 MIR448-201ENST00000362131 111 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 Y_RNA.62-201ENST00000362840 99 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AL121834.1-202ENST00000404494 277 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 RPL23AP48-201ENST00000406913 488 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 RNA5SP104-201ENST00000410989 118 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 PGBD4P8-201ENST00000412993 562 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 TRIM60P17-201ENST00000415181 719 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 DPY19L1P2-201ENST00000426647 915 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 VDAC1P6-201ENST00000430062 855 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AL353748.1-201ENST00000440753 474 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC091167.1-201ENST00000492017 396 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 KRT19P6-201ENST00000510983 209 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 SMARCE1P4-201ENST00000523647 241 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 TVP23BP1-201ENST00000557500 617 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC084757.1-201ENST00000559987 490 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC008536.1-201ENST00000602872 669 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC008638.3-201ENST00000603341 463 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC114878.2-201ENST00000604863 1251 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 GMCL1P2-201ENST00000605230 823 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC114781.5-201ENST00000615297 108 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC095038.2-201ENST00000621464 1070 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC011944.2-201ENST00000624440 683 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 AP000843.1-201ENST00000624880 701 ntBASIC4.14□□□□□ -1.75
TREX1Q9NSU2 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
TREX1Q9NSU2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AC012020.1-201ENST00000624541 1728 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 RNU6-697P-201ENST00000363348 107 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AL603766.1-201ENST00000407763 664 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 RPL37P18-201ENST00000411602 243 ntBASIC4.13□□□□□ -1.75
TREX1Q9NSU2 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms