Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GNG5P1-201ENST00000255500 204 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 MIR504-201ENST00000385065 83 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 RPL21P43-201ENST00000425440 472 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 CYCSP4-201ENST00000429682 331 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 AC006011.1-201ENST00000442758 349 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 YPEL5P3-201ENST00000547227 352 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 FKBP1BP1-201ENST00000553366 325 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 Z95327.3-201ENST00000610385 572 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 RNU6-7-201ENST00000364784 107 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 RNU6-8-201ENST00000365467 107 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 MIR1251-201ENST00000408552 70 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 UBE2V1P3-201ENST00000439651 417 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 EIF4A1P11-201ENST00000451239 222 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 CYCSP53-201ENST00000455540 265 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 STMN1P2-201ENST00000508435 439 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 AC091544.4-201ENST00000555268 342 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 AC007546.2-201ENST00000623996 360 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CHD8Q9HCK8 VPS35P1-201ENST00000563400 1518 ntBASIC3.83□□□□□ -1.8
CHD8Q9HCK8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 RNA5SP80-201ENST00000410475 111 ntBASIC3.82□□□□□ -1.8
CHD8Q9HCK8 RPS20P14-201ENST00000412545 360 ntBASIC3.82□□□□□ -1.8
CHD8Q9HCK8 AL158827.1-201ENST00000416300 391 ntBASIC3.82□□□□□ -1.8
CHD8Q9HCK8 AC017083.1-201ENST00000428093 483 ntBASIC3.82□□□□□ -1.8
CHD8Q9HCK8 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 AC087241.4-201ENST00000612441 480 ntBASIC3.82□□□□□ -1.8
CHD8Q9HCK8 AL157762.1-201ENST00000619612 415 ntBASIC3.82□□□□□ -1.8
CHD8Q9HCK8 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 AF001550.2-201ENST00000636643 217 ntBASIC3.82□□□□□ -1.8
CHD8Q9HCK8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 ZNF402P-201ENST00000404435 3100 ntBASIC3.82□□□□□ -1.8
CHD8Q9HCK8 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 AC099670.2-201ENST00000435130 321 ntBASIC3.82□□□□□ -1.8
CHD8Q9HCK8 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 AC068769.1-201ENST00000474767 2426 ntBASIC3.82□□□□□ -1.8
CHD8Q9HCK8 AC093849.1-201ENST00000563631 2209 ntBASIC3.82□□□□□ -1.8
CHD8Q9HCK8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHD8Q9HCK8 AL121839.2-201ENST00000565058 6943 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 MIR422A-201ENST00000362286 90 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 RNA5SP267-201ENST00000364893 126 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 PCNPP4-201ENST00000414817 517 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 RPL21P23-201ENST00000446654 460 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 FDX1P2-201ENST00000450769 375 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 RPS20P32-201ENST00000456044 356 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 RPL35AP15-201ENST00000468042 339 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 RN7SKP244-201ENST00000516513 307 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 NDUFA5P2-201ENST00000519723 344 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AC110743.1-201ENST00000584870 478 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AC005618.4-201ENST00000625053 554 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms