Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MIR217-201ENST00000384817 110 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 MIR105-1-201ENST00000385222 81 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 RNU6-1300P-201ENST00000391046 108 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC092642.1-201ENST00000392417 425 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AL590084.2-201ENST00000401481 382 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 RNU2-65P-201ENST00000410162 185 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AL161449.1-201ENST00000414531 1199 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 RPL7P44-201ENST00000424827 742 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 Z93242.1-201ENST00000427102 353 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC005345.1-201ENST00000431868 217 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AL161722.2-201ENST00000434731 981 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 RPS26P40-201ENST00000435209 294 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC012075.1-201ENST00000436549 580 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 ACTR3P2-201ENST00000439585 1257 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 RPS27AP15-201ENST00000447672 466 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 COX6CP18-201ENST00000448769 222 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 RSL24D1P3-201ENST00000449255 495 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 MTND1P16-201ENST00000465177 898 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 RN7SL717P-201ENST00000478343 297 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 RN7SL273P-201ENST00000481561 299 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC104090.1-201ENST00000506341 1171 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC105185.1-201ENST00000518705 535 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 HIGD1AP6-201ENST00000521833 279 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AP001207.1-201ENST00000524051 481 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC004217.3-201ENST00000551552 878 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC004825.1-201ENST00000555068 586 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC090888.3-201ENST00000558917 509 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC040904.1-201ENST00000590850 223 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 DUXAP11-201ENST00000603858 526 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AL589674.2-201ENST00000604304 337 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC096553.1-201ENST00000605169 829 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC131235.4-201ENST00000609288 620 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC108359.1-201ENST00000616451 1211 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC009090.3-201ENST00000616553 565 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC010608.2-201ENST00000624830 470 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 CR392039.4-201ENST00000624968 501 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC116618.1-201ENST00000634617 774 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 SAMMSON-227ENST00000642114 1199 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AC134882.1-201ENST00000603738 1676 ntBASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM54Q9BYV2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 MIR133B-201ENST00000362210 119 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 RNA5SP335-201ENST00000363817 110 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 RN7SKP15-201ENST00000364742 309 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 SNORD116-1-201ENST00000384335 95 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 MIR92A2-201ENST00000385299 75 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 MIR143-201ENST00000385300 106 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 RPL12P9-201ENST00000412942 488 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AC098592.1-201ENST00000419352 333 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AL133325.1-201ENST00000421090 382 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AL390023.1-201ENST00000428836 262 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms