Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC100827.5-201ENST00000615883 426 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 AC073569.3-201ENST00000619055 682 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 AC104446.1-201ENST00000613728 1321 ntBASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP4AQ9BY43 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AC103591.2-201ENST00000265259 766 ntBASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AL357515.1-201ENST00000402967 542 ntBASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 RPS4XP9-201ENST00000405151 780 ntBASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AL606495.1-201ENST00000422100 813 ntBASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 RPS17P8-201ENST00000434525 335 ntBASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AC104971.1-201ENST00000495117 578 ntBASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AC105233.1-201ENST00000498840 781 ntBASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 MIR4270-201ENST00000581799 70 ntBASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AC022726.1-201ENST00000587475 207 ntBASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 AC112503.1-201ENST00000608436 391 ntBASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.22□□□□□ -1.41
CHMP4AQ9BY43 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CHMP4AQ9BY43 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.21□□□□□ -1.41
CHMP4AQ9BY43 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
CHMP4AQ9BY43 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 SNORA11C-201ENST00000408532 129 ntBASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 RPL37P18-201ENST00000411602 243 ntBASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 AC008173.1-201ENST00000418901 264 ntBASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 AL359265.2-201ENST00000434367 631 ntBASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 RNFT1P2-201ENST00000443064 757 ntBASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 AL513533.1-201ENST00000453728 415 ntBASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 AC008280.2-201ENST00000455473 307 ntBASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 SCARNA22-201ENST00000503991 125 ntBASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 HMGB1P1-201ENST00000522557 636 ntBASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 AC095057.3-201ENST00000567102 1157 ntBASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 RN7SL802P-201ENST00000577858 299 ntBASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 AC103792.1-201ENST00000603591 919 ntBASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 FAM27B-201ENST00000610601 213 ntBASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 TLK1P1-201ENST00000456760 2440 ntBASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CHMP4AQ9BY43 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 AC025574.1-201ENST00000554784 1653 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 SNORD56.4-201ENST00000363883 71 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 RN7SKP16-201ENST00000410180 299 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 VN1R37P-201ENST00000419096 748 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 RPS6P12-201ENST00000432491 726 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 AC016831.4-201ENST00000438302 307 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 RPS26P56-201ENST00000444468 240 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 RPL21P47-201ENST00000483696 477 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 RN7SKP276-201ENST00000516242 268 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 RNU6-709P-201ENST00000517257 104 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 MORF4L1P3-201ENST00000525966 950 ntBASIC6.2□□□□□ -1.42
CHMP4AQ9BY43 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms