Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 DDX43P2-201ENST00000604753 1354 ntBASIC5.32□□□□□ -1.56
SMOQ99835 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
SMOQ99835 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SMOQ99835 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SMOQ99835 AC008549.2-201ENST00000333482 706 ntBASIC5.32□□□□□ -1.56
SMOQ99835 RNU6-1339P-201ENST00000363574 91 ntBASIC5.32□□□□□ -1.56
SMOQ99835 RNU6-560P-201ENST00000364007 108 ntBASIC5.32□□□□□ -1.56
SMOQ99835 SNORD116-4-201ENST00000384733 96 ntBASIC5.32□□□□□ -1.56
SMOQ99835 RNU6-1320P-201ENST00000390838 107 ntBASIC5.32□□□□□ -1.56
SMOQ99835 RNU6-1269P-201ENST00000391139 107 ntBASIC5.32□□□□□ -1.56
SMOQ99835 AL021407.1-201ENST00000404531 386 ntBASIC5.32□□□□□ -1.56
SMOQ99835 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.32□□□□□ -1.56
SMOQ99835 RNU6-757P-201ENST00000410334 100 ntBASIC5.32□□□□□ -1.56
SMOQ99835 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.32□□□□□ -1.56
SMOQ99835 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.32□□□□□ -1.56
SMOQ99835 AC079809.1-201ENST00000415468 276 ntBASIC5.32□□□□□ -1.56
SMOQ99835 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.32□□□□□ -1.56
SMOQ99835 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.32□□□□□ -1.56
SMOQ99835 OR6K4P-201ENST00000423179 955 ntBASIC5.32□□□□□ -1.56
SMOQ99835 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.32□□□□□ -1.56
SMOQ99835 COX6CP13-201ENST00000428703 226 ntBASIC5.32□□□□□ -1.56
SMOQ99835 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.32□□□□□ -1.56
SMOQ99835 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.32□□□□□ -1.56
SMOQ99835 AC096638.2-201ENST00000434965 711 ntBASIC5.32□□□□□ -1.56
SMOQ99835 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.32□□□□□ -1.56
SMOQ99835 VN1R54P-201ENST00000435210 1049 ntBASIC5.32□□□□□ -1.56
SMOQ99835 GTF2IP7-202ENST00000436677 309 ntBASIC5.32□□□□□ -1.56
SMOQ99835 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.32□□□□□ -1.56
SMOQ99835 AC009263.1-201ENST00000441193 1239 ntBASIC5.32□□□□□ -1.56
SMOQ99835 RPL31P44-201ENST00000447680 377 ntBASIC5.32□□□□□ -1.56
SMOQ99835 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.32□□□□□ -1.56
SMOQ99835 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SMOQ99835 AC079776.3-201ENST00000450665 370 ntBASIC5.32□□□□□ -1.56
SMOQ99835 RNU6-599P-201ENST00000459383 107 ntBASIC5.32□□□□□ -1.56
SMOQ99835 RNU6-1193P-201ENST00000459461 107 ntBASIC5.32□□□□□ -1.56
SMOQ99835 MTND4LP3-201ENST00000468320 276 ntBASIC5.32□□□□□ -1.56
SMOQ99835 BZW1P2-201ENST00000473537 826 ntBASIC5.32□□□□□ -1.56
SMOQ99835 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.32□□□□□ -1.56
SMOQ99835 AC104090.1-201ENST00000506341 1171 ntBASIC5.32□□□□□ -1.56
SMOQ99835 MRPS33P2-201ENST00000507850 322 ntBASIC5.32□□□□□ -1.56
SMOQ99835 NDUFB5P1-201ENST00000508134 564 ntBASIC5.32□□□□□ -1.56
SMOQ99835 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.32□□□□□ -1.56
SMOQ99835 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.32□□□□□ -1.56
SMOQ99835 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.32□□□□□ -1.56
SMOQ99835 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.32□□□□□ -1.56
SMOQ99835 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SMOQ99835 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.32□□□□□ -1.56
SMOQ99835 NMNAT1P1-201ENST00000554095 876 ntBASIC5.32□□□□□ -1.56
SMOQ99835 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SMOQ99835 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.32□□□□□ -1.56
SMOQ99835 AC090616.2-202ENST00000584248 222 ntBASIC5.32□□□□□ -1.56
SMOQ99835 AC024940.4-201ENST00000605507 246 ntBASIC5.32□□□□□ -1.56
SMOQ99835 AC135507.1-201ENST00000607214 561 ntBASIC5.32□□□□□ -1.56
SMOQ99835 RNU6-368P-201ENST00000620928 107 ntBASIC5.32□□□□□ -1.56
SMOQ99835 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SMOQ99835 RNU6-538P-201ENST00000622329 107 ntBASIC5.32□□□□□ -1.56
SMOQ99835 AC091905.4-201ENST00000623432 202 ntBASIC5.32□□□□□ -1.56
SMOQ99835 AC145207.9-201ENST00000623802 325 ntBASIC5.32□□□□□ -1.56
SMOQ99835 AC091965.5-201ENST00000624785 342 ntBASIC5.32□□□□□ -1.56
SMOQ99835 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.32□□□□□ -1.56
SMOQ99835 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.32□□□□□ -1.56
SMOQ99835 AL137100.1-201ENST00000556703 1620 ntBASIC5.32□□□□□ -1.56
SMOQ99835 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.32□□□□□ -1.56
SMOQ99835 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SMOQ99835 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SMOQ99835 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.32□□□□□ -1.56
SMOQ99835 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.32□□□□□ -1.56
SMOQ99835 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.32□□□□□ -1.56
SMOQ99835 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SMOQ99835 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SMOQ99835 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.32□□□□□ -1.56
SMOQ99835 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SMOQ99835 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SMOQ99835 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SMOQ99835 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SMOQ99835 AP000776.1-201ENST00000530032 1663 ntBASIC5.31□□□□□ -1.56
SMOQ99835 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
SMOQ99835 GVINP1-202ENST00000531871 7271 ntBASIC5.31□□□□□ -1.56
SMOQ99835 CDC27P2-201ENST00000425026 1922 ntBASIC5.31□□□□□ -1.56
SMOQ99835 MTND4P31-201ENST00000425607 1343 ntBASIC5.31□□□□□ -1.56
SMOQ99835 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SMOQ99835 Y_RNA.51-201ENST00000362725 102 ntBASIC5.31□□□□□ -1.56
SMOQ99835 Y_RNA.201-201ENST00000364052 96 ntBASIC5.31□□□□□ -1.56
SMOQ99835 RNU4-24P-201ENST00000364565 139 ntBASIC5.31□□□□□ -1.56
SMOQ99835 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SMOQ99835 OR1L1-202ENST00000373686 1083 ntBASIC5.31□□□□□ -1.56
SMOQ99835 SNORA51.8-201ENST00000384234 132 ntBASIC5.31□□□□□ -1.56
SMOQ99835 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.31□□□□□ -1.56
SMOQ99835 RNU6-77P-201ENST00000410554 91 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AL445213.1-201ENST00000412589 747 ntBASIC5.31□□□□□ -1.56
SMOQ99835 COX5BP7-201ENST00000414780 274 ntBASIC5.31□□□□□ -1.56
SMOQ99835 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.31□□□□□ -1.56
SMOQ99835 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.31□□□□□ -1.56
SMOQ99835 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.31□□□□□ -1.56
SMOQ99835 MTCO1P3-201ENST00000429327 192 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.31□□□□□ -1.56
SMOQ99835 YWHAZP7-201ENST00000436906 631 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.31□□□□□ -1.56
SMOQ99835 RPS29P9-201ENST00000440360 171 ntBASIC5.31□□□□□ -1.56
SMOQ99835 OR7E125P-201ENST00000443450 846 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms