Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
USP47Q96K76 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.63□□□□□ -1.51
USP47Q96K76 AC117434.1-201ENST00000419971 836 ntBASIC5.63□□□□□ -1.51
USP47Q96K76 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USP47Q96K76 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.63□□□□□ -1.51
USP47Q96K76 MTCO1P54-201ENST00000430139 712 ntBASIC5.63□□□□□ -1.51
USP47Q96K76 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.63□□□□□ -1.51
USP47Q96K76 FABP3P2-201ENST00000453169 399 ntBASIC5.63□□□□□ -1.51
USP47Q96K76 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.63□□□□□ -1.51
USP47Q96K76 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.63□□□□□ -1.51
USP47Q96K76 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.63□□□□□ -1.51
USP47Q96K76 RPL7L1P8-201ENST00000469911 741 ntBASIC5.63□□□□□ -1.51
USP47Q96K76 RPL31P61-201ENST00000496160 376 ntBASIC5.63□□□□□ -1.51
USP47Q96K76 UBTFL9-201ENST00000534504 1148 ntBASIC5.63□□□□□ -1.51
USP47Q96K76 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.63□□□□□ -1.51
USP47Q96K76 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.63□□□□□ -1.51
USP47Q96K76 AC067931.1-201ENST00000624190 671 ntBASIC5.63□□□□□ -1.51
USP47Q96K76 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP47Q96K76 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP47Q96K76 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP47Q96K76 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
USP47Q96K76 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.62□□□□□ -1.51
USP47Q96K76 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP47Q96K76 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP47Q96K76 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP47Q96K76 SCN1A-220ENST00000641603 12506 ntBASIC5.62□□□□□ -1.51
USP47Q96K76 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.62□□□□□ -1.51
USP47Q96K76 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP47Q96K76 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.62□□□□□ -1.51
USP47Q96K76 RNU6-761P-201ENST00000384148 107 ntBASIC5.62□□□□□ -1.51
USP47Q96K76 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.62□□□□□ -1.51
USP47Q96K76 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.62□□□□□ -1.51
USP47Q96K76 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
USP47Q96K76 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.62□□□□□ -1.51
USP47Q96K76 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.62□□□□□ -1.51
USP47Q96K76 AC010460.1-201ENST00000507087 466 ntBASIC5.62□□□□□ -1.51
USP47Q96K76 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.62□□□□□ -1.51
USP47Q96K76 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.62□□□□□ -1.51
USP47Q96K76 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.62□□□□□ -1.51
USP47Q96K76 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.62□□□□□ -1.51
USP47Q96K76 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP47Q96K76 AC012603.1-201ENST00000606424 528 ntBASIC5.62□□□□□ -1.51
USP47Q96K76 AC039056.2-201ENST00000622261 511 ntBASIC5.62□□□□□ -1.51
USP47Q96K76 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.61□□□□□ -1.51
USP47Q96K76 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP47Q96K76 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.61□□□□□ -1.51
USP47Q96K76 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP47Q96K76 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP47Q96K76 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.61□□□□□ -1.51
USP47Q96K76 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
USP47Q96K76 AC125336.1-201ENST00000508893 2827 ntBASIC5.61□□□□□ -1.51
USP47Q96K76 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP47Q96K76 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP47Q96K76 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.61□□□□□ -1.51
USP47Q96K76 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.61□□□□□ -1.51
USP47Q96K76 SNORD46.1-201ENST00000364139 104 ntBASIC5.61□□□□□ -1.51
USP47Q96K76 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.61□□□□□ -1.51
USP47Q96K76 MIR513A2-201ENST00000385249 127 ntBASIC5.61□□□□□ -1.51
USP47Q96K76 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.61□□□□□ -1.51
USP47Q96K76 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.61□□□□□ -1.51
USP47Q96K76 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.61□□□□□ -1.51
USP47Q96K76 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.61□□□□□ -1.51
USP47Q96K76 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP47Q96K76 AC110792.1-201ENST00000491826 472 ntBASIC5.61□□□□□ -1.51
USP47Q96K76 RNU6-352P-201ENST00000516908 107 ntBASIC5.61□□□□□ -1.51
USP47Q96K76 NDUFA5P2-201ENST00000519723 344 ntBASIC5.61□□□□□ -1.51
USP47Q96K76 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.61□□□□□ -1.51
USP47Q96K76 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.61□□□□□ -1.51
USP47Q96K76 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.61□□□□□ -1.51
USP47Q96K76 AC008739.3-201ENST00000603262 127 ntBASIC5.61□□□□□ -1.51
USP47Q96K76 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.61□□□□□ -1.51
USP47Q96K76 AC073530.2-201ENST00000623987 261 ntBASIC5.61□□□□□ -1.51
USP47Q96K76 AP003400.2-201ENST00000624036 666 ntBASIC5.61□□□□□ -1.51
USP47Q96K76 AL596275.2-204ENST00000641628 552 ntBASIC5.61□□□□□ -1.51
USP47Q96K76 AL596275.2-206ENST00000641957 626 ntBASIC5.61□□□□□ -1.51
USP47Q96K76 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP47Q96K76 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
USP47Q96K76 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
USP47Q96K76 MAPK10-253ENST00000641010 4072 ntBASIC5.61□□□□□ -1.51
USP47Q96K76 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP47Q96K76 AL078595.2-201ENST00000605309 1780 ntBASIC5.6□□□□□ -1.51
USP47Q96K76 OR8F1P-201ENST00000425243 930 ntBASIC5.6□□□□□ -1.51
USP47Q96K76 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.6□□□□□ -1.51
USP47Q96K76 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.6□□□□□ -1.51
USP47Q96K76 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.6□□□□□ -1.51
USP47Q96K76 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.6□□□□□ -1.51
USP47Q96K76 AC091564.1-201ENST00000464563 479 ntBASIC5.6□□□□□ -1.51
USP47Q96K76 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.6□□□□□ -1.51
USP47Q96K76 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.6□□□□□ -1.51
USP47Q96K76 NPM1P29-201ENST00000483112 803 ntBASIC5.6□□□□□ -1.51
USP47Q96K76 RPS4XP15-201ENST00000489210 795 ntBASIC5.6□□□□□ -1.51
USP47Q96K76 AC021733.2-201ENST00000518830 497 ntBASIC5.6□□□□□ -1.51
USP47Q96K76 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP47Q96K76 AC091516.1-201ENST00000549191 703 ntBASIC5.6□□□□□ -1.51
USP47Q96K76 MIR3944-201ENST00000581277 108 ntBASIC5.6□□□□□ -1.51
USP47Q96K76 AP005262.1-201ENST00000582646 997 ntBASIC5.6□□□□□ -1.51
USP47Q96K76 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.6□□□□□ -1.51
USP47Q96K76 AC099669.2-201ENST00000616549 437 ntBASIC5.6□□□□□ -1.51
USP47Q96K76 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP47Q96K76 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms