Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MTND2P2-201ENST00000434633 945 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 FTH1P16-201ENST00000435241 552 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 TPTE2P3-201ENST00000441562 1189 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 HMGB3P22-202ENST00000451823 572 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 CDH12P4-201ENST00000517835 295 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 CDH12P3-201ENST00000517935 295 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 CDH12P1-201ENST00000518435 295 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 VTA1P2-201ENST00000520205 911 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AC109635.6-201ENST00000525487 1113 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AL109766.1-201ENST00000555080 552 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AC021483.2-201ENST00000567415 758 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 MIR4715-201ENST00000584117 79 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AL139286.1-201ENST00000604465 483 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AC113403.1-201ENST00000604910 193 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AC090948.1-201ENST00000607464 549 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AL035461.2-201ENST00000619201 524 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AP000346.3-201ENST00000622821 210 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.85
RTN4IP1Q8WWV3 MAPK10-373ENST00000641983 6772 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 RNA5SP105-201ENST00000391123 113 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 RPL23AP59-201ENST00000399415 461 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 DHFRP5-201ENST00000406944 564 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 SNORA11F-201ENST00000408237 128 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC244453.4-201ENST00000419150 388 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC007064.3-201ENST00000422608 359 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC245028.1-201ENST00000423259 256 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 MTND2P11-201ENST00000423638 648 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 Z85994.2-201ENST00000434327 452 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 PHBP16-201ENST00000446318 950 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 Z95152.1-201ENST00000453556 656 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 RPS29P33-201ENST00000456717 146 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 RPL7P32-201ENST00000457119 744 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 RNU6-775P-201ENST00000459318 96 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 RN7SL98P-201ENST00000462271 300 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 RN7SL738P-201ENST00000470264 297 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 RPS23P1-201ENST00000491662 432 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 RN7SL810P-201ENST00000493031 276 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 HMGB3P14-201ENST00000494195 599 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 BNIP3P41-201ENST00000503774 571 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC022784.5-201ENST00000522241 437 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC079791.1-201ENST00000605356 973 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 BNIP3P7-201ENST00000605641 516 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC025175.1-201ENST00000606482 759 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AL356274.1-201ENST00000617064 410 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC007546.1-201ENST00000619452 559 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC140479.6-201ENST00000633535 357 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC090017.1-201ENST00000548612 1779 ntBASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
RTN4IP1Q8WWV3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.51□□□□□ -1.85
RTN4IP1Q8WWV3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTN4IP1Q8WWV3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RTN4IP1Q8WWV3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTN4IP1Q8WWV3 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.51□□□□□ -1.85
RTN4IP1Q8WWV3 AC053481.2-202ENST00000582394 1500 ntBASIC3.51□□□□□ -1.85
RTN4IP1Q8WWV3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
RTN4IP1Q8WWV3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
RTN4IP1Q8WWV3 MIR331-201ENST00000362302 94 ntBASIC3.51□□□□□ -1.85
RTN4IP1Q8WWV3 ZNF603P-201ENST00000405613 487 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms