Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.06□□□□□ -1.6
RTL9Q8NET4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTL9Q8NET4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTL9Q8NET4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
RTL9Q8NET4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTL9Q8NET4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTL9Q8NET4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTL9Q8NET4 IL6STP1-201ENST00000346911 1020 ntBASIC5.05□□□□□ -1.6
RTL9Q8NET4 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.05□□□□□ -1.6
RTL9Q8NET4 RNU6-213P-201ENST00000384051 104 ntBASIC5.05□□□□□ -1.6
RTL9Q8NET4 MIR449B-201ENST00000384995 97 ntBASIC5.05□□□□□ -1.6
RTL9Q8NET4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTL9Q8NET4 HDGFP1-201ENST00000405943 252 ntBASIC5.05□□□□□ -1.6
RTL9Q8NET4 AC073335.1-201ENST00000427776 363 ntBASIC5.05□□□□□ -1.6
RTL9Q8NET4 RPS4XP4-201ENST00000443195 763 ntBASIC5.05□□□□□ -1.6
RTL9Q8NET4 GAPDHP36-201ENST00000480688 918 ntBASIC5.05□□□□□ -1.6
RTL9Q8NET4 TCP11X3P-202ENST00000514289 1254 ntBASIC5.05□□□□□ -1.6
RTL9Q8NET4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.05□□□□□ -1.6
RTL9Q8NET4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.05□□□□□ -1.6
RTL9Q8NET4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.05□□□□□ -1.6
RTL9Q8NET4 YPEL5P3-201ENST00000547227 352 ntBASIC5.05□□□□□ -1.6
RTL9Q8NET4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.05□□□□□ -1.6
RTL9Q8NET4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.05□□□□□ -1.6
RTL9Q8NET4 AC064801.1-201ENST00000612025 407 ntBASIC5.05□□□□□ -1.6
RTL9Q8NET4 AC023509.5-201ENST00000617434 807 ntBASIC5.05□□□□□ -1.6
RTL9Q8NET4 MIR7702-201ENST00000621931 59 ntBASIC5.05□□□□□ -1.6
RTL9Q8NET4 AC138907.10-201ENST00000623708 983 ntBASIC5.05□□□□□ -1.6
RTL9Q8NET4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RTL9Q8NET4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTL9Q8NET4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.05□□□□□ -1.6
RTL9Q8NET4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTL9Q8NET4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTL9Q8NET4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RTL9Q8NET4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTL9Q8NET4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RTL9Q8NET4 Y_RNA.333-201ENST00000365274 102 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 RN7SKP199-201ENST00000410325 305 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 RAB9AP3-201ENST00000412737 573 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTL9Q8NET4 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTL9Q8NET4 OR5BE1P-201ENST00000425977 939 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTL9Q8NET4 TBCAP1-201ENST00000436520 327 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 RAB9AP1-201ENST00000449393 573 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 FCF1P7-201ENST00000451185 558 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 AC110792.1-201ENST00000491826 472 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTL9Q8NET4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTL9Q8NET4 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTL9Q8NET4 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 AC120057.2-201ENST00000571520 271 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 AC110743.1-201ENST00000584870 478 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 AC008739.3-201ENST00000603262 127 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 OR5BE1P-202ENST00000641168 1176 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTL9Q8NET4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTL9Q8NET4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTL9Q8NET4 AC067945.1-201ENST00000342609 618 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 YME1L1P1-201ENST00000429435 297 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 NOTCH2P1-201ENST00000443481 624 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 AL157884.3-201ENST00000448273 1184 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 RPS4XP15-201ENST00000489210 795 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 RPL29P14-201ENST00000495837 428 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 MTND1P6-201ENST00000523621 946 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.04□□□□□ -1.6
RTL9Q8NET4 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.04□□□□□ -1.6
RTL9Q8NET4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTL9Q8NET4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTL9Q8NET4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RTL9Q8NET4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.03□□□□□ -1.6
RTL9Q8NET4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTL9Q8NET4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTL9Q8NET4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RTL9Q8NET4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTL9Q8NET4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.03□□□□□ -1.6
RTL9Q8NET4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.03□□□□□ -1.6
RTL9Q8NET4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.03□□□□□ -1.6
RTL9Q8NET4 CRYBB2P1-203ENST00000415709 538 ntBASIC5.03□□□□□ -1.6
RTL9Q8NET4 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTL9Q8NET4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.03□□□□□ -1.6
RTL9Q8NET4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.03□□□□□ -1.6
RTL9Q8NET4 AC092447.2-201ENST00000435487 669 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms