Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 RNU6-185P-201ENST00000384421 107 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 MIR93-201ENST00000385024 80 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 RN7SKP167-201ENST00000411047 285 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 OR51B3P-201ENST00000412287 913 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 LINC01881-201ENST00000416103 412 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC007000.2-201ENST00000442564 487 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC112498.1-201ENST00000444401 332 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AL353718.1-201ENST00000451028 517 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AURKAPS1-201ENST00000451805 1212 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 HMGB1P26-201ENST00000452520 628 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC016724.1-201ENST00000453215 421 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 MTND2P30-201ENST00000456663 382 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC079841.1-201ENST00000481228 950 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 RN7SL30P-201ENST00000488416 306 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC090568.1-201ENST00000509499 856 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC025768.1-201ENST00000510057 267 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 UBTFL9-201ENST00000534504 1148 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 CBX3P2-202ENST00000583365 535 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC135178.6-201ENST00000605314 398 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC004775.1-201ENST00000607389 753 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AL031666.3-201ENST00000609320 1006 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC110792.4-201ENST00000609843 298 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC103858.2-201ENST00000621471 543 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC007342.8-201ENST00000623278 678 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AL049767.1-202ENST00000637826 242 ntBASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCDC71LQ8N9Z2 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AL139811.1-201ENST00000424779 2299 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 SAMMSON-226ENST00000642089 1582 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 MFSD8-220ENST00000641243 1422 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 SNORD74.4-201ENST00000364129 80 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 MIR142-201ENST00000384835 87 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 SDHCP2-201ENST00000398565 501 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AL645733.1-201ENST00000402250 217 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 SNORA74C-2-201ENST00000411179 201 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 PTP4A1P3-201ENST00000433661 420 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AL353748.1-201ENST00000440753 474 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 RPS27AP16-201ENST00000492222 470 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 RPL36AP41-201ENST00000493820 306 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AC025459.1-201ENST00000504072 156 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 MTND3P24-201ENST00000506306 329 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 RN7SKP147-201ENST00000517154 244 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 IGKV2D-10-201ENST00000520194 281 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 PHBP17-201ENST00000528576 541 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 OR11J2P-201ENST00000555298 907 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AC090888.3-201ENST00000558917 509 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 MIR3614-201ENST00000581261 86 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AC068790.5-201ENST00000602741 355 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AC011453.2-201ENST00000603737 729 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 AC005972.3-201ENST00000606304 481 ntBASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC71LQ8N9Z2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms