Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC242843.1-201ENST00000618702 573 ntBASIC6.11□□□□□ -1.43
VPS8Q8N3P4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 UBE3AP2-201ENST00000429033 2259 ntBASIC6.11□□□□□ -1.43
VPS8Q8N3P4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS8Q8N3P4 AL122126.1-201ENST00000546905 1318 ntBASIC6.1□□□□□ -1.43
VPS8Q8N3P4 AL031595.2-201ENST00000624215 19071 ntBASIC6.1□□□□□ -1.43
VPS8Q8N3P4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC6.1□□□□□ -1.43
VPS8Q8N3P4 RPL7P2-201ENST00000427639 268 ntBASIC6.1□□□□□ -1.43
VPS8Q8N3P4 SNORA84-201ENST00000459229 133 ntBASIC6.1□□□□□ -1.43
VPS8Q8N3P4 AC084198.1-201ENST00000477747 402 ntBASIC6.1□□□□□ -1.43
VPS8Q8N3P4 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS8Q8N3P4 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS8Q8N3P4 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS8Q8N3P4 CYCSP30-201ENST00000546447 172 ntBASIC6.1□□□□□ -1.43
VPS8Q8N3P4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS8Q8N3P4 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.1□□□□□ -1.43
VPS8Q8N3P4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS8Q8N3P4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC6.1□□□□□ -1.43
VPS8Q8N3P4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS8Q8N3P4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS8Q8N3P4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS8Q8N3P4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS8Q8N3P4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS8Q8N3P4 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
VPS8Q8N3P4 RN7SKP156-201ENST00000410308 342 ntBASIC6.09□□□□□ -1.43
VPS8Q8N3P4 CYCSP10-201ENST00000417973 294 ntBASIC6.09□□□□□ -1.43
VPS8Q8N3P4 HMGB3P5-201ENST00000428894 612 ntBASIC6.09□□□□□ -1.43
VPS8Q8N3P4 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS8Q8N3P4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS8Q8N3P4 NPM1P29-201ENST00000483112 803 ntBASIC6.09□□□□□ -1.43
VPS8Q8N3P4 AL139099.1-201ENST00000497398 403 ntBASIC6.09□□□□□ -1.43
VPS8Q8N3P4 RAC1P2-201ENST00000511164 579 ntBASIC6.09□□□□□ -1.43
VPS8Q8N3P4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS8Q8N3P4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS8Q8N3P4 AC107982.3-201ENST00000584957 985 ntBASIC6.09□□□□□ -1.43
VPS8Q8N3P4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
VPS8Q8N3P4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS8Q8N3P4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS8Q8N3P4 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS8Q8N3P4 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS8Q8N3P4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS8Q8N3P4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
VPS8Q8N3P4 AC100871.1-201ENST00000507871 1456 ntBASIC6.09□□□□□ -1.44
VPS8Q8N3P4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
VPS8Q8N3P4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
VPS8Q8N3P4 RNA5SP97-201ENST00000365006 84 ntBASIC6.08□□□□□ -1.44
VPS8Q8N3P4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 MIR93-201ENST00000385024 80 ntBASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 RNA5SP208-201ENST00000516156 78 ntBASIC6.08□□□□□ -1.44
VPS8Q8N3P4 RNU1-45P-201ENST00000517191 141 ntBASIC6.08□□□□□ -1.44
VPS8Q8N3P4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AL390816.3-201ENST00000604527 1066 ntBASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AC128687.2-201ENST00000609657 566 ntBASIC6.08□□□□□ -1.44
VPS8Q8N3P4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AC034229.5-201ENST00000624258 185 ntBASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AC012442.3-202ENST00000636742 206 ntBASIC6.08□□□□□ -1.44
VPS8Q8N3P4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC6.08□□□□□ -1.44
VPS8Q8N3P4 RN7SKP159-201ENST00000410657 292 ntBASIC6.08□□□□□ -1.44
VPS8Q8N3P4 OR51A6P-201ENST00000418680 1004 ntBASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AL139247.1-201ENST00000422768 325 ntBASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS8Q8N3P4 AC063952.1-203ENST00000634410 658 ntBASIC6.08□□□□□ -1.44
VPS8Q8N3P4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 DDX18P6-201ENST00000450119 1997 ntBASIC6.07□□□□□ -1.44
VPS8Q8N3P4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 MIR30B-201ENST00000384850 88 ntBASIC6.07□□□□□ -1.44
VPS8Q8N3P4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
VPS8Q8N3P4 SNORA48.7-201ENST00000391302 135 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms