Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 ASNSP3-201ENST00000451989 1306 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 MAPK10-287ENST00000641217 3037 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC133552.1-201ENST00000569988 4007 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC073343.1-201ENST00000328239 651 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 SNORA63C-201ENST00000364578 129 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 SNORD42.2-201ENST00000365570 69 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 VN1R36P-201ENST00000414936 291 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC023141.10-201ENST00000415634 200 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC009965.2-201ENST00000425328 970 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 USP24P1-201ENST00000433802 779 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC012075.1-201ENST00000436549 580 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 UBE2V1P13-201ENST00000436983 439 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 Z80107.2-201ENST00000445127 392 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC006480.1-201ENST00000449887 378 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC104073.1-201ENST00000451988 151 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 MTND3P16-201ENST00000452205 344 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AL354710.1-201ENST00000453641 246 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 RPL36AP55-201ENST00000454114 305 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC117395.2-201ENST00000463122 1128 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 RN7SL160P-201ENST00000468558 284 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 RN7SL88P-201ENST00000480166 299 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC006070.1-201ENST00000508151 193 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC018552.3-201ENST00000567416 561 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AL683813.2-201ENST00000605245 502 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC019257.2-201ENST00000605539 497 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 CUX2P1-201ENST00000606426 298 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 RNU6-89P-201ENST00000606519 100 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC004908.1-201ENST00000606572 541 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AL354702.2-202ENST00000641481 890 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 BRAFP1-201ENST00000445336 2703 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC125232.1-201ENST00000452554 1408 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 SNX18P3-202ENST00000565670 1750 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 CLCA3P-203ENST00000490028 2781 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 CCDC150P1-201ENST00000537123 2215 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 RNU6-97P-201ENST00000363387 104 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 Y_RNA.367-201ENST00000365544 101 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 RNU6-1160P-201ENST00000384546 104 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 MIR559-201ENST00000385188 96 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 PTMAP8-201ENST00000397729 342 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 MIR541-201ENST00000401360 84 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 RPSAP44-201ENST00000406712 884 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 RNU4-26P-201ENST00000410270 107 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms