Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC015849.2-201ENST00000605738 409 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AL445423.1-201ENST00000609941 536 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 MIR6758-201ENST00000620653 63 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AC006840.1-201ENST00000623069 542 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 AP003497.2-201ENST00000624220 967 ntBASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
C9orf40Q8IXQ3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 HSPA8P17-201ENST00000427029 1382 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 RNU1-20P-201ENST00000363314 162 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 RNU2-72P-201ENST00000411175 163 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 P2RY10P2-201ENST00000416730 913 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 PDSS1P1-201ENST00000422953 1114 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AL513321.1-201ENST00000441175 761 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AC006326.1-201ENST00000445465 787 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 MTND2P30-201ENST00000456663 382 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 RN7SL303P-201ENST00000469773 251 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 RPL21P136-201ENST00000605378 396 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AC015813.4-201ENST00000610469 179 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AL021997.2-201ENST00000615674 271 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AC007546.1-201ENST00000619452 559 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 AL359715.4-201ENST00000606629 1436 ntBASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
C9orf40Q8IXQ3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 RPL32P3-201ENST00000359025 275 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AL353692.2-201ENST00000407054 335 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 MIR1911-201ENST00000410783 80 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 NRBF2P2-201ENST00000413087 861 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AC011933.1-201ENST00000413334 321 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 GAPDHP49-201ENST00000421421 961 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 MTND2P11-201ENST00000423638 648 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AP000936.3-201ENST00000438127 255 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AL591363.1-201ENST00000450091 483 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AC116533.1-201ENST00000459748 321 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AC010469.1-201ENST00000463864 576 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AC026979.1-201ENST00000492525 396 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AC025768.1-201ENST00000510057 267 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 HIGD1AP18-201ENST00000520730 278 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AL352979.3-201ENST00000553515 247 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 CD24P2-201ENST00000565486 219 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms