Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AL359092.1-201ENST00000417156 265 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 LINC01347-201ENST00000417964 355 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 OSTCP4-201ENST00000424397 449 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 TVP23CP1-201ENST00000450317 639 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 Y_RNA.653-201ENST00000459091 95 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AC112206.1-201ENST00000468416 477 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AC078785.3-201ENST00000476607 425 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 RPL19P11-201ENST00000495944 589 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 MTCO1P29-201ENST00000496868 288 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 RPL7L1P4-201ENST00000513004 707 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 SUB1P1-201ENST00000524415 382 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AC112187.2-201ENST00000604345 283 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AC243773.3-201ENST00000613270 256 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AL133173.2-201ENST00000614270 90 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AC015871.3-201ENST00000618835 2261 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AC034111.1-201ENST00000562143 3770 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 AC104966.1-201ENST00000467010 1464 ntBASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
NPAS3Q8IXF0 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AC079949.2-201ENST00000617117 2933 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 CASC19-246ENST00000641625 1606 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AC119674.1-204ENST00000641348 1343 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 RNA5SP188-201ENST00000362916 129 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 RNA5SP65-201ENST00000363166 119 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 Y_RNA.150-201ENST00000363562 102 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 MIR525-201ENST00000384978 85 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 SNORD65-201ENST00000391079 73 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AL360271.1-201ENST00000395679 510 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AL591416.1-201ENST00000404015 867 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 MIR548F5-201ENST00000408421 86 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 RNU2-9P-201ENST00000410194 145 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AC017035.1-201ENST00000411999 1115 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AC008753.1-201ENST00000423096 284 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 RPL5P7-201ENST00000444235 813 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 NPM1P39-201ENST00000449818 867 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 RANP1-206ENST00000455094 651 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AC094085.1-201ENST00000468914 584 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 RPL22P13-201ENST00000493291 347 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 RNA5SP418-201ENST00000515951 117 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 RNU6-138P-201ENST00000515952 107 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 RNU6-976P-201ENST00000516086 111 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 Y_RNA.682-201ENST00000516457 100 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 Y_RNA.721-201ENST00000517207 102 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AP002812.4-201ENST00000532139 286 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AC113195.1-201ENST00000579952 141 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 RN7SL404P-201ENST00000582421 281 ntBASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.84□□□□□ -1.31
NPAS3Q8IXF0 AL022345.1-201ENST00000607292 135 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms