Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 RN7SL691P-201ENST00000494487 301 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 AC025554.1-201ENST00000505641 188 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 AC092593.2-201ENST00000513866 913 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 RNA5SP49-201ENST00000516450 115 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 TRAV8-5-201ENST00000537369 341 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 AC135001.1-201ENST00000544546 283 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 AC068831.4-201ENST00000556118 109 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 AC084757.1-201ENST00000559987 490 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 AC234771.5-201ENST00000600161 514 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 AC008638.3-201ENST00000603341 463 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 SNORA35B-201ENST00000607417 129 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 AL356121.2-201ENST00000624715 780 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 AL139254.3-201ENST00000641097 674 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 RPS4XP9-201ENST00000405151 780 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 ELOCP19-201ENST00000411919 318 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AL160275.2-201ENST00000412010 394 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 NRBF2P2-201ENST00000413087 861 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 NDUFA12P1-201ENST00000455914 406 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 RPL36AP13-201ENST00000457490 317 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 snoU13.1-201ENST00000459157 104 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 RPS29P22-201ENST00000472363 168 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AC007686.1-201ENST00000488511 463 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AP001960.1-201ENST00000506494 658 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AC018797.3-201ENST00000513388 1241 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AC022616.2-201ENST00000523185 300 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 ADAM3B-201ENST00000569937 840 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AC000123.2-201ENST00000623124 461 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AP005264.7-201ENST00000625003 745 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 AL133412.1-201ENST00000380194 2992 ntBASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL3Q8IVW4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC009951.1-201ENST00000623674 2614 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 RN7SKP44-201ENST00000363602 316 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 GCNT6-201ENST00000379591 934 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 RPS27AP7-201ENST00000422792 455 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC092013.1-201ENST00000438795 332 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AL353748.1-201ENST00000440753 474 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC010469.1-201ENST00000463864 576 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC013356.1-201ENST00000489027 564 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC008958.1-201ENST00000511047 682 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 KCTD9P2-201ENST00000512203 1013 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC105233.3-201ENST00000531125 744 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms