Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 IQCB2P-201ENST00000401788 1633 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 RNA5SP332-201ENST00000391063 115 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AL645927.1-201ENST00000396783 406 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AL049697.2-201ENST00000403708 294 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 RAC1P3-201ENST00000416129 580 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 OR6K4P-201ENST00000423179 955 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 MTND2P11-201ENST00000423638 648 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 RPL12P28-201ENST00000430852 489 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AC007563.3-201ENST00000433233 371 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 Z99127.2-201ENST00000441426 334 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AL162591.2-201ENST00000449634 317 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 HMGB3P22-202ENST00000451823 572 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 HAUS1P1-201ENST00000505275 832 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 PCNAP1-201ENST00000505363 709 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AC108471.1-201ENST00000513977 287 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AC034244.2-201ENST00000514668 858 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 AC063950.1-201ENST00000552036 308 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 MIR4646-201ENST00000580775 63 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 MIR7155-201ENST00000615925 56 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 RPL23AP61-201ENST00000623642 466 ntBASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NUDCD3Q8IVD9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 Z82217.1-201ENST00000625157 8149 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AC009229.4-201ENST00000623854 1947 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AC131971.1-201ENST00000332881 1482 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AC008033.1-201ENST00000216407 1162 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 RNA5SP513-201ENST00000364648 118 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 RPL7AP25-201ENST00000423357 805 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AL138785.1-201ENST00000425821 331 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 RWDD4P2-201ENST00000426392 563 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AC008072.1-201ENST00000434254 824 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 TPTE2P3-201ENST00000441562 1189 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 DHFRP3-201ENST00000455595 559 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 PPIAP21-201ENST00000464473 501 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AC021205.1-201ENST00000468797 348 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 RWDD4P1-201ENST00000488019 565 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AC018797.3-201ENST00000513388 1241 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AP000676.2-201ENST00000529711 301 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AC069061.3-201ENST00000582254 823 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AC068790.5-201ENST00000602741 355 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AL354984.3-201ENST00000604803 325 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AC005084.1-201ENST00000605160 304 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AL035461.2-201ENST00000619201 524 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AC095038.2-201ENST00000621464 1070 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 MIR6719-201ENST00000622428 87 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AC145207.9-201ENST00000623802 325 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AL049536.1-201ENST00000625043 744 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 AL592437.2-201ENST00000421655 2434 ntBASIC4.19□□□□□ -1.74
NUDCD3Q8IVD9 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms