Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 SNORA74C-1-201ENST00000580726 201 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 VN1R9P-201ENST00000614184 867 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 CR381572.2-201ENST00000624852 397 ntBASIC4.91□□□□□ -1.62
PRPF39Q86UA1 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PRPF39Q86UA1 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.9□□□□□ -1.62
PRPF39Q86UA1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.9□□□□□ -1.62
PRPF39Q86UA1 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PRPF39Q86UA1 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.9□□□□□ -1.62
PRPF39Q86UA1 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PRPF39Q86UA1 DHX9P1-201ENST00000436565 3076 ntBASIC4.9□□□□□ -1.62
PRPF39Q86UA1 RNU6-543P-201ENST00000362576 108 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 SNORA63.3-201ENST00000362682 132 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC136624.1-201ENST00000400791 413 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 RN7SKP100-201ENST00000411258 284 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC114755.2-201ENST00000413520 361 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AL138785.1-201ENST00000425821 331 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC004938.1-201ENST00000438468 308 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC011753.3-201ENST00000443436 406 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC009220.1-201ENST00000451614 275 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 RN7SL481P-201ENST00000477764 299 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 RPL23AP72-201ENST00000492447 435 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC023050.1-201ENST00000498198 304 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC106806.2-201ENST00000509365 500 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC008562.1-201ENST00000521763 330 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 HMGB1P1-201ENST00000522557 636 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 C1DP5-201ENST00000525775 383 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 GSTP1P1-201ENST00000548078 319 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC084757.1-201ENST00000559987 490 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC093249.4-201ENST00000564755 259 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC090312.2-201ENST00000582687 378 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 MIR4512-201ENST00000583257 77 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC093765.1-201ENST00000603758 881 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AL121932.1-201ENST00000605542 214 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AP005229.2-201ENST00000609980 697 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC096586.1-201ENST00000610267 561 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC023509.5-201ENST00000617434 807 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 FRG1HP-204ENST00000617940 757 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AP000346.3-201ENST00000622821 210 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC106730.3-201ENST00000624568 641 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 AC022031.1-201ENST00000585985 2593 ntBASIC4.9□□□□□ -1.63
PRPF39Q86UA1 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.9□□□□□ -1.63
PRPF39Q86UA1 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 MIR141-201ENST00000384975 95 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 U3.30-201ENST00000391308 210 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 RPL23AP59-201ENST00000399415 461 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 NMNAT1P2-201ENST00000435192 860 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 NPM1P33-201ENST00000438918 872 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 AC092170.1-201ENST00000440211 356 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 RN7SL860P-201ENST00000473738 223 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 IGBP1P5-201ENST00000507524 1000 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 PGBD4P4-201ENST00000509673 613 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 RAB9BP1-201ENST00000519581 626 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 OR4U1P-201ENST00000554958 912 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 NTAN1P1-201ENST00000603150 646 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 AC018926.1-201ENST00000616335 435 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms