Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 DCAF13P3-201ENST00000561147 1334 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 RNU1-77P-201ENST00000390868 162 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 GSTA8P-201ENST00000404253 637 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AL590084.1-201ENST00000407885 387 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 MIR1271-201ENST00000408537 86 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 RNU2-50P-201ENST00000410494 143 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 TMBIM7P-201ENST00000418074 855 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AL133325.1-201ENST00000421090 382 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 RPL36AP10-201ENST00000421785 322 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AC010099.3-201ENST00000423896 409 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AC007327.1-201ENST00000447461 264 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AL591473.1-201ENST00000464297 313 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 RN7SL443P-201ENST00000464331 290 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AC011979.1-201ENST00000472300 483 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 RPL7P51-201ENST00000490532 749 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AC138938.1-201ENST00000515431 782 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 MTND2P38-201ENST00000522536 667 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 MIR3912-201ENST00000577566 105 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 PCNAP1-202ENST00000595299 752 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 NIFKP6-201ENST00000598115 845 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AC008536.1-201ENST00000602872 669 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 SUGT1P3-202ENST00000604259 383 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AC025811.1-201ENST00000604312 472 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AC107075.1-201ENST00000613695 314 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AC005840.5-201ENST00000619166 599 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 Z99129.2-201ENST00000619967 314 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 AC022106.2-201ENST00000620114 757 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 CYP4F35P-202ENST00000636121 390 ntBASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
RUNDC3AQ59EK9 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AP000756.2-201ENST00000624168 2567 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AC235565.1-201ENST00000456962 1325 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AC119751.3-201ENST00000399720 670 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 RNA5SP178-201ENST00000410380 128 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AL008987.1-201ENST00000415528 237 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 QRSL1P2-201ENST00000418582 964 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AC093655.2-201ENST00000425735 631 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 CNOT7P1-201ENST00000429006 852 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 FAM96AP1-201ENST00000430879 482 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 RPL7P34-201ENST00000433316 712 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 MTCO2P20-201ENST00000437339 673 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 MTCYBP31-201ENST00000438855 1122 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AL450023.3-201ENST00000440592 271 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AL031584.1-201ENST00000447169 754 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 COX6CP18-201ENST00000448769 222 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 VN1R40P-201ENST00000455196 941 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AC006511.1-201ENST00000470614 315 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AC104689.1-201ENST00000473356 768 ntBASIC4.78□□□□□ -1.64
RUNDC3AQ59EK9 AC022795.1-201ENST00000473808 480 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms