Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 RNU1-43P-201ENST00000365052 165 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 SNORA67-201ENST00000384423 137 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AP000357.1-201ENST00000409926 1165 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 RN7SKP16-201ENST00000410180 299 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 RNU6-584P-201ENST00000410350 95 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 TCEA1P4-201ENST00000415066 844 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 GTF2IP2-201ENST00000424290 697 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 IPMKP1-201ENST00000425988 855 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 FAM96AP1-201ENST00000430879 482 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AL161722.2-201ENST00000434731 981 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 RPL35AP21-201ENST00000437667 333 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 RPL7P31-201ENST00000450192 724 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 GTF2IP12-201ENST00000456547 356 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 DUXAP8-207ENST00000456786 622 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AC058823.1-201ENST00000485315 474 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 NIFKP7-201ENST00000503365 834 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AC006427.1-201ENST00000514359 712 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AC010376.1-201ENST00000522101 334 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 HMGB1P1-201ENST00000522557 636 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 OR7E13P-201ENST00000526052 910 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AC092490.3-201ENST00000545370 572 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 ATP5F1P7-201ENST00000567330 760 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 VN1R84P-201ENST00000593697 235 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AC005252.1-201ENST00000604518 1063 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AC005377.1-201ENST00000605126 456 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AL109618.2-201ENST00000605527 211 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AC092653.1-201ENST00000608509 531 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 DUXAP10-204ENST00000612052 616 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 AC006338.2-201ENST00000616864 791 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 LINC00901.1-201ENST00000617252 152 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 U6.107-201ENST00000637108 79 ntBASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM3Q53GG5 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC009951.1-201ENST00000623674 2614 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 SNORD65C-201ENST00000390962 71 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AL078599.1-201ENST00000402075 293 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AL049693.1-201ENST00000402760 611 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 DUTP5-201ENST00000406790 469 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AL449283.1-202ENST00000418249 604 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC009480.2-201ENST00000422916 432 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC115285.1-201ENST00000424879 736 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 ARF4P4-201ENST00000439608 520 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC092170.1-201ENST00000440211 356 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 RPS26P30-201ENST00000443431 335 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 TDGF1P1-201ENST00000445734 527 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC105399.1-202ENST00000447303 205 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 BTF3P6-201ENST00000448054 499 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 EXOSC3P1-201ENST00000448649 500 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC006511.1-201ENST00000470614 315 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC022034.3-201ENST00000471393 478 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 TRBV8-2-201ENST00000475637 270 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC090114.3-201ENST00000479267 829 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC073073.1-201ENST00000493920 463 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC096571.1-202ENST00000506634 735 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC091163.3-201ENST00000518269 1144 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC034205.1-201ENST00000520621 638 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms