Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ECM1P2-201ENST00000503354 1577 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 TLK1P1-201ENST00000456760 2440 ntBASIC4.34□□□□□ -1.72
SCN1BQ07699 OR14L1P-202ENST00000641545 3009 ntBASIC4.34□□□□□ -1.72
SCN1BQ07699 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
SCN1BQ07699 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
SCN1BQ07699 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SCN1BQ07699 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN1BQ07699 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN1BQ07699 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.33□□□□□ -1.72
SCN1BQ07699 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.33□□□□□ -1.72
SCN1BQ07699 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN1BQ07699 AC011493.1-201ENST00000596753 1632 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 AC025263.3-201ENST00000622965 1396 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SCN1BQ07699 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SCN1BQ07699 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN1BQ07699 MIR448-201ENST00000362131 111 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 SNORA73.1-201ENST00000363107 205 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 SNORA2.3-201ENST00000383920 135 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 RNU6-1151P-201ENST00000384684 107 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 MIR153-1-201ENST00000384914 90 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 DSTNP4-201ENST00000399472 474 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 AL355615.1-201ENST00000406187 641 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.33□□□□□ -1.72
SCN1BQ07699 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SCN1BQ07699 RGS17P1-201ENST00000423358 553 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 AC093655.2-201ENST00000425735 631 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.33□□□□□ -1.72
SCN1BQ07699 AL009174.1-201ENST00000426577 416 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 AC005033.1-201ENST00000428904 813 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 AL513175.1-201ENST00000431492 780 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.33□□□□□ -1.72
SCN1BQ07699 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.33□□□□□ -1.72
SCN1BQ07699 AC044797.1-201ENST00000445744 679 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.33□□□□□ -1.72
SCN1BQ07699 TRY2P-201ENST00000448860 689 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.33□□□□□ -1.72
SCN1BQ07699 Z92846.1-201ENST00000456203 268 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 RNU7-140P-201ENST00000459546 60 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 OR2AO1P-201ENST00000476497 403 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 RN7SL727P-201ENST00000482164 296 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 RPL7P51-201ENST00000490532 749 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.33□□□□□ -1.72
SCN1BQ07699 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SCN1BQ07699 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.33□□□□□ -1.72
SCN1BQ07699 RN7SKP277-201ENST00000516895 283 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.33□□□□□ -1.72
SCN1BQ07699 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
SCN1BQ07699 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.33□□□□□ -1.72
SCN1BQ07699 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.33□□□□□ -1.72
SCN1BQ07699 CYP2C60P-201ENST00000566088 139 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 MTCO1P40-201ENST00000574371 625 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 AC090079.2-201ENST00000575289 768 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.33□□□□□ -1.72
SCN1BQ07699 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.33□□□□□ -1.72
SCN1BQ07699 AC009948.4-201ENST00000604692 675 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 AP005432.2-201ENST00000608162 586 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 AC013468.1-201ENST00000608680 598 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 AC105429.2-201ENST00000610567 517 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.33□□□□□ -1.72
SCN1BQ07699 AC253576.2-201ENST00000618815 580 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 MIR6837-201ENST00000620884 64 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.33□□□□□ -1.72
SCN1BQ07699 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.33□□□□□ -1.72
SCN1BQ07699 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN1BQ07699 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN1BQ07699 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SCN1BQ07699 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN1BQ07699 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN1BQ07699 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN1BQ07699 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCN1BQ07699 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCN1BQ07699 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN1BQ07699 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SCN1BQ07699 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCN1BQ07699 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.32□□□□□ -1.72
SCN1BQ07699 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN1BQ07699 U3.3-201ENST00000362986 216 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 RNU1-43P-201ENST00000365052 165 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
SCN1BQ07699 MIR124-3-201ENST00000384866 87 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 U3.35-201ENST00000408405 208 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 OR3A2-201ENST00000408891 1076 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN1BQ07699 TAF13P2-201ENST00000416876 286 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 AC234779.1-201ENST00000425910 285 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 RPL36P19-201ENST00000430744 301 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 AC093414.1-201ENST00000434712 514 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN1BQ07699 AC004938.1-201ENST00000438468 308 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN1BQ07699 AC000041.1-201ENST00000439655 175 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 AC073052.1-201ENST00000440417 714 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 BX276092.4-201ENST00000452056 248 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 RPS15AP1-201ENST00000457423 391 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN1BQ07699 AC010469.1-201ENST00000463864 576 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 AL049829.1-201ENST00000465411 156 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 PRDX3P4-201ENST00000470828 747 ntBASIC4.32□□□□□ -1.72
SCN1BQ07699 AC091959.2-201ENST00000477363 321 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms