Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC3.17□□□□□ -1.9
CCL20P78556 AC087888.1-201ENST00000550884 1254 ntBASIC3.17□□□□□ -1.9
CCL20P78556 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.17□□□□□ -1.9
CCL20P78556 AC022968.1-201ENST00000567372 442 ntBASIC3.17□□□□□ -1.9
CCL20P78556 AC009101.1-201ENST00000568135 242 ntBASIC3.17□□□□□ -1.9
CCL20P78556 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.17□□□□□ -1.9
CCL20P78556 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.17□□□□□ -1.9
CCL20P78556 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.17□□□□□ -1.9
CCL20P78556 AL133243.1-201ENST00000614487 366 ntBASIC3.17□□□□□ -1.9
CCL20P78556 AC004825.2-201ENST00000616634 455 ntBASIC3.17□□□□□ -1.9
CCL20P78556 AL591424.2-201ENST00000617023 128 ntBASIC3.17□□□□□ -1.9
CCL20P78556 MIR6737-201ENST00000617385 70 ntBASIC3.17□□□□□ -1.9
CCL20P78556 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCL20P78556 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCL20P78556 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCL20P78556 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCL20P78556 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCL20P78556 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CCL20P78556 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCL20P78556 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.16□□□□□ -1.9
CCL20P78556 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCL20P78556 INTS6P1-201ENST00000504674 2530 ntBASIC3.16□□□□□ -1.9
CCL20P78556 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCL20P78556 MIR323A-201ENST00000362199 86 ntBASIC3.16□□□□□ -1.9
CCL20P78556 Y_RNA.62-201ENST00000362840 99 ntBASIC3.16□□□□□ -1.9
CCL20P78556 RNU1-87P-201ENST00000363727 170 ntBASIC3.16□□□□□ -1.9
CCL20P78556 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCL20P78556 MIR92A2-201ENST00000385299 75 ntBASIC3.16□□□□□ -1.9
CCL20P78556 CXADRP1-201ENST00000398098 1095 ntBASIC3.16□□□□□ -1.9
CCL20P78556 AL391417.1-201ENST00000404100 426 ntBASIC3.16□□□□□ -1.9
CCL20P78556 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.16□□□□□ -1.9
CCL20P78556 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.16□□□□□ -1.9
CCL20P78556 RPL7AP25-201ENST00000423357 805 ntBASIC3.16□□□□□ -1.9
CCL20P78556 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL20P78556 AC093716.1-201ENST00000435923 377 ntBASIC3.16□□□□□ -1.9
CCL20P78556 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL20P78556 RAB28P3-201ENST00000448325 597 ntBASIC3.16□□□□□ -1.9
CCL20P78556 AC073850.1-201ENST00000449243 255 ntBASIC3.16□□□□□ -1.9
CCL20P78556 HMGB3P21-201ENST00000452483 547 ntBASIC3.16□□□□□ -1.9
CCL20P78556 DNAJC19P1-201ENST00000455312 319 ntBASIC3.16□□□□□ -1.9
CCL20P78556 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL20P78556 RNU6-1218P-201ENST00000458990 108 ntBASIC3.16□□□□□ -1.9
CCL20P78556 AC004801.2-202ENST00000463559 283 ntBASIC3.16□□□□□ -1.9
CCL20P78556 MTND6P6-201ENST00000478031 263 ntBASIC3.16□□□□□ -1.9
CCL20P78556 RN7SL826P-201ENST00000479724 288 ntBASIC3.16□□□□□ -1.9
CCL20P78556 LARP7P4-201ENST00000481075 878 ntBASIC3.16□□□□□ -1.9
CCL20P78556 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCL20P78556 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCL20P78556 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL20P78556 SNORD116-26-201ENST00000516006 96 ntBASIC3.16□□□□□ -1.9
CCL20P78556 RNA5SP73-201ENST00000516744 108 ntBASIC3.16□□□□□ -1.9
CCL20P78556 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.16□□□□□ -1.9
CCL20P78556 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.16□□□□□ -1.9
CCL20P78556 EDDM3DP-201ENST00000554692 434 ntBASIC3.16□□□□□ -1.9
CCL20P78556 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.16□□□□□ -1.9
CCL20P78556 AL109741.3-201ENST00000561748 592 ntBASIC3.16□□□□□ -1.9
CCL20P78556 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL20P78556 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.16□□□□□ -1.9
CCL20P78556 MIR4644-201ENST00000579929 84 ntBASIC3.16□□□□□ -1.9
CCL20P78556 MIR3667-201ENST00000581025 74 ntBASIC3.16□□□□□ -1.9
CCL20P78556 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCL20P78556 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL20P78556 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL20P78556 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL20P78556 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CCL20P78556 PSMA6P4-201ENST00000603247 718 ntBASIC3.16□□□□□ -1.9
CCL20P78556 AL390816.3-201ENST00000604527 1066 ntBASIC3.16□□□□□ -1.9
CCL20P78556 CXADRP3-202ENST00000617265 1100 ntBASIC3.16□□□□□ -1.9
CCL20P78556 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL20P78556 CFTRP2-201ENST00000634304 199 ntBASIC3.16□□□□□ -1.9
CCL20P78556 AL049767.1-202ENST00000637826 242 ntBASIC3.16□□□□□ -1.9
CCL20P78556 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.16□□□□□ -1.9
CCL20P78556 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.16□□□□□ -1.9
CCL20P78556 AL133412.1-201ENST00000380194 2992 ntBASIC3.16□□□□□ -1.9
CCL20P78556 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCL20P78556 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CCL20P78556 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCL20P78556 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CCL20P78556 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCL20P78556 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.15□□□□□ -1.9
CCL20P78556 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.15□□□□□ -1.9
CCL20P78556 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCL20P78556 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CCL20P78556 AC103591.2-201ENST00000265259 766 ntBASIC3.15□□□□□ -1.91
CCL20P78556 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL20P78556 U8.4-201ENST00000363626 134 ntBASIC3.15□□□□□ -1.91
CCL20P78556 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL20P78556 RNA5SP397-201ENST00000391323 118 ntBASIC3.15□□□□□ -1.91
CCL20P78556 RN7SKP273-201ENST00000411392 314 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL20P78556 MTCYBP7-201ENST00000419540 1134 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AC048351.1-201ENST00000420064 602 ntBASIC3.15□□□□□ -1.91
CCL20P78556 NFYAP1-201ENST00000431953 972 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.15□□□□□ -1.91
CCL20P78556 FTH1P16-201ENST00000435241 552 ntBASIC3.15□□□□□ -1.91
CCL20P78556 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.15□□□□□ -1.91
CCL20P78556 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL20P78556 RPL23AP52-201ENST00000439311 478 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AL512326.1-201ENST00000443050 721 ntBASIC3.15□□□□□ -1.91
CCL20P78556 RPL7P31-201ENST00000450192 724 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms